Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02093 ATGGGTAACAACTTGCACCAAGTACTCAGAAGCCTCTGTTTTAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCAGAATATCTTGGAACAGATTGGTTATGGGAAATTTTCGCACAACGCATTAGGGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCTGTTACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAGGTCGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGCCCCACTTGGTGTTATTCAGCTTGGCTCTCTTAATAAAGTGATTGAAGATATGGGGTTTGTAACTCATATCAGAAATCTCTTTCTGTCTACTCAAAATTGCCCCATAGCACAATGTCCTAGTCAAGTACAGGGTAGTTTGAAGAGTTCTTTATCTCAGTCAATATCCAATATGATGAATGTGGAGCATCATGATTTTAAAGAGATGAAGCCTCTCTATGGGAGGAAGTGTGAAGAAGGAAGTAGTGGCTGCAAAGATGTGAGGTTGGAATCAGAAAACAATGTCTCGTCATTTTTAAGTGACTTTATTACAGATAATGATTTAATATGTCCATCAGATAAAGTCAGAGTTGATTCTGCATGTTTTCCTTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAGTTGCATTGTGTGGATAATAACCAAAAAGGAGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCCCAACATGTTGAAAAGCCAAAGTTTGGTTCTGAGCCTTCTTACAATGATATGTCAAATGTGTTGAATTTCCCTGCTGGTTGTGAGCTACATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAAAGTTTTGATTGGCCAGCGCAGCTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATCAGCACCAGCCAATTGACTTCTGAATCTCGTCCTGAGCATCTTTTGGAAGCAATGGTGGCTAACATTAGCCACAGTAACAATGATGTTAATAGTGAATTATCGTTTTGTACATCAATGCAATCTGCAATGGCCTCAGCAAAAAATCATGAAGCTTCTACTCATAATGTGTATGCTATTAATTCAGAAGGTTATTCAATAGATCAGTTCTCTCTTGTCAAAGAGGACAAACACCATTCTCTGAGTTCATCATCAGGGATATGTGGTGTTATGTCCTCCAAAGGTGTTTCATCTACATTCCCCAGTTCAAGTAGTGGACAACTTGAAAGGTCATCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGACCCGGGGAAAGTTGTAGGCCGCGACCAAGGGACAGACAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGTTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCGCCATAAAGCACATGCTGTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAAGGTGGAACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGTATTCACAATAA 2001 0.4068 MGNNLHQVLRSLCFNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCQNILEQIGYGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVAPLGVIQLGSLNKVIEDMGFVTHIRNLFLSTQNCPIAQCPSQVQGSLKSSLSQSISNMMNVEHHDFKEMKPLYGRKCEEGSSGCKDVRLESENNVSSFLSDFITDNDLICPSDKVRVDSACFPSAFLDTVVCETDKLHCVDNNQKGVLNFTQPSDANSQHVEKPKFGSEPSYNDMSNVLNFPAGCELHEALGPSFLKGSKSFDWPAQLNQDMKTVEMSDEISTSQLTSESRPEHLLEAMVANISHSNNDVNSELSFCTSMQSAMASAKNHEASTHNVYAINSEGYSIDQFSLVKEDKHHSLSSSSGICGVMSSKGVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVYSQ 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02093 666 MobiDBLite consensus disorder prediction 456 495 - -
Viun1g02093 666 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Viun1g02093 666 MobiDBLite consensus disorder prediction 288 307 - -
Viun1g02093 666 MobiDBLite consensus disorder prediction 471 495 - -
Viun1g02093 666 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 480 529 IPR011598 GO:0046983
Viun1g02093 666 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 493 534 IPR036638 GO:0046983
Viun1g02093 666 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 184 663 IPR043561 GO:0003700|GO:0006355
Viun1g02093 666 MobiDBLite consensus disorder prediction 456 470 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02093 Viun-Chr1 32259346 32266105 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02093 321 661 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 49.030 2.18e-89 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02093 - - gmx:100798490 792.341