Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02092 ATGGGTAACAACTTGCACCAAGTACTCAGAAGCCTCTGTTTTAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCAGAATATCTTGGAACAGATTGGTTATGGGAAATTTTCGCACAACGCATTAGGGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCTGTTACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAGGTCGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGCCCCACTTGGTGTTATTCAGCTTGGCTCTCTTAATAAAGTGATTGAAGATATGGGGTTTGTAACTCATATCAGAAATCTCTTTCTGTCTACTCAAAATTGCCCCATAGCACAATGTCCTAGTCAAGTACAGGGTAGTTTGAAGAGTTCTTTATCTCAGAAAATGTCTGATAACGTGGCCAAACAGGAGGGGCCTGAATTGTACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGAGCATCATGATTTTAAAGAGATGAAGCCTCTCTATGGGAGGAAGTGTGAAGAAGGAAGTAGTGGCTGCAAAGATGTGAGGTTGGAATCAGAAAACAATGTCTCGTCATTTTTAAGTGACTTTATTACAGATAATGATTTAATATGTCCATCAGATAAAGTCAGAGTTGATTCTGCATGTTTTCCTTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAGTTGCATTGTGTGGATAATAACCAAAAAGGAGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCCCAACATGTTGAAAAGCCAAAGTTTGGTTCTGAGCCTTCTTACAATGATATGTCAAATGTGTTGAATTTCCCTGCTGGTTGTGAGCTACATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAAAGTTTTGATTGGCCAGCGCAGCTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATCAGCACCAGCCAATTGACTTCTGAATCTCGTCCTGAGCATCTTTTGGAAGCAATGGTGGCTAACATTAGCCACAGTAACAATGATGTTAATAGTGAATTATCGTTTTGTACATCAATGCAATCTGCAATGGCCTCAGCAAAAAATCATGAAGCTTCTACTCATAATGTGTATGCTATTAATTCAGAAGGTTATTCAATAGATCAGTTCTCTCTTGTCAAAGAGGACAAACACCATTCTCTGAGTTCATCATCAGGGATATGTGGTGTTATGTCCTCCAAAGGTGTTTCATCTACATTCCCCAGTTCAAGTAGTGGACAACTTGAAAGGTCATCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGACCCGGGGAAAGTTGTAGGCCGCGACCAAGGGACAGACAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGTTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCGCCATAAAGCACATGCTGTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAAGGTGGAACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGTATTCACAATAA 2073 0.4076 MGNNLHQVLRSLCFNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCQNILEQIGYGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVAPLGVIQLGSLNKVIEDMGFVTHIRNLFLSTQNCPIAQCPSQVQGSLKSSLSQKMSDNVAKQEGPELYSDESSILLQSISNMMNVEHHDFKEMKPLYGRKCEEGSSGCKDVRLESENNVSSFLSDFITDNDLICPSDKVRVDSACFPSAFLDTVVCETDKLHCVDNNQKGVLNFTQPSDANSQHVEKPKFGSEPSYNDMSNVLNFPAGCELHEALGPSFLKGSKSFDWPAQLNQDMKTVEMSDEISTSQLTSESRPEHLLEAMVANISHSNNDVNSELSFCTSMQSAMASAKNHEASTHNVYAINSEGYSIDQFSLVKEDKHHSLSSSSGICGVMSSKGVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVYSQ 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02092 690 MobiDBLite consensus disorder prediction 480 494 - -
Viun1g02092 690 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 166 IPR025610 -
Viun1g02092 690 MobiDBLite consensus disorder prediction 495 519 - -
Viun1g02092 690 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 504 553 IPR011598 GO:0046983
Viun1g02092 690 MobiDBLite consensus disorder prediction 312 331 - -
Viun1g02092 690 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 517 558 IPR036638 GO:0046983
Viun1g02092 690 MobiDBLite consensus disorder prediction 480 519 - -
Viun1g02092 690 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 185 687 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02092 Viun-Chr1 32259346 32266109 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02092 345 685 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 49.030 3.89e-89 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02092 - - gmx:100798490 1156.74