Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02091 ATGGGTAACAACTTGCACCAAGTACTCAGAAGCCTCTGTTTTAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCAGAATATCTTGGAACAGATTGGTTATGGGAAATTTTCGCACAACGCATTAGGGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCTGTTACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAGGTCGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGCCCCACTTGGTGTTATTCAGCTTGGCTCTCTTAATAAACAGGTGATTGAAGATATGGGGTTTGTAACTCATATCAGAAATCTCTTTCTGTCTACTCAAAATTGCCCCATAGCACAATGTCCTAGTCAAGTACAGGGTAGTTTGAAGAGTTCTTTATCTCAGCTGGATATATCGAAGGAAAATTTGTCTTCAGATGTTTTGCCGACTGACTTTTACAATTCACAAAAATCTATGAAAAGTGAAACAGCAGATGTTTTAATGTCCCTTCAATGTTCTGAGAAGAACTATGAACCTTATTCTGCTTGTCAGAAAATGTCTGATAACGTGGCCAAACAGGAGGGGCCTGAATTGTACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGAGCATCATGATTTTAAAGAGATGAAGCCTCTCTATGGGAGGAAGTGTGAAGAAGGAAGTAGTGGCTGCAAAGATGTGAGGTTGGAATCAGAAAACAATGTCTCGTCATTTTTAAGTGACTTTATTACAGATAATGATTTAATATGTCCATCAGATAAAGTCAGAGTTGATTCTGCATGTTTTCCTTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAGTTGCATTGTGTGGATAATAACCAAAAAGGAGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCCCAACATGTTGAAAAGCCAAAGTTTGGTTCTGAGCCTTCTTACAATGATATGTCAAATGTGTTGAATTTCCCTGCTGGTTGTGAGCTACATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAAAGTTTTGATTGGCCAGCGCAGCTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATCAGCACCAGCCAATTGACTTCTGAATCTCGTCCTGAGCATCTTTTGGAAGCAATGGTGGCTAACATTAGCCACAGTAACAATGATGTTAATAGTGAATTATCGTTTTGTACATCAATGCAATCTGCAATGGCCTCAGCAAAAAATCATGAAGCTTCTACTCATAATGTGTATGCTATTAATTCAGAAGGTTATTCAATAGATCAGTTCTCTCTTGTCAAAGAGGACAAACACCATTCTCTGAGTTCATCATCAGGGATATGTGGTGTTATGTCCTCCAAAGGTGTTTCATCTACATTCCCCAGTTCAAGTAGTGGACAACTTGAAAGGTCATCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGACCCGGGGAAAGTTGTAGGCCGCGACCAAGGGACAGACAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGTTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCGCCATAAAGCACATGCTGTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAAGGTGGAACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGTATTCACAATAA 2223 0.404 MGNNLHQVLRSLCFNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCQNILEQIGYGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVAPLGVIQLGSLNKQVIEDMGFVTHIRNLFLSTQNCPIAQCPSQVQGSLKSSLSQLDISKENLSSDVLPTDFYNSQKSMKSETADVLMSLQCSEKNYEPYSACQKMSDNVAKQEGPELYSDESSILLQSISNMMNVEHHDFKEMKPLYGRKCEEGSSGCKDVRLESENNVSSFLSDFITDNDLICPSDKVRVDSACFPSAFLDTVVCETDKLHCVDNNQKGVLNFTQPSDANSQHVEKPKFGSEPSYNDMSNVLNFPAGCELHEALGPSFLKGSKSFDWPAQLNQDMKTVEMSDEISTSQLTSESRPEHLLEAMVANISHSNNDVNSELSFCTSMQSAMASAKNHEASTHNVYAINSEGYSIDQFSLVKEDKHHSLSSSSGICGVMSSKGVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVYSQ 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02091 740 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 554 603 IPR011598 GO:0046983
Viun1g02091 740 MobiDBLite consensus disorder prediction 530 544 - -
Viun1g02091 740 MobiDBLite consensus disorder prediction 545 569 - -
Viun1g02091 740 MobiDBLite consensus disorder prediction 362 381 - -
Viun1g02091 740 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Viun1g02091 740 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 737 IPR043561 GO:0003700|GO:0006355
Viun1g02091 740 MobiDBLite consensus disorder prediction 530 569 - -
Viun1g02091 740 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 567 608 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02091 Viun-Chr1 32259346 32266113 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02091 1 735 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 40.077 2.76e-153 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02091 - - ccaj:109796613 1248.8