Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02090 ATGGGTAACAACTTGCACCAAGTACTCAGAAGCCTCTGTTTTAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCAGAATATCTTGGAACAGATTGGTTATGGGAAATTTTCGCACAACGCATTAGGGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCTGTTACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAGGTCGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGCCCCACTTGGTGTTATTCAGCTTGGCTCTCTTAATAAACAGGTGATTGAAGATATGGGGTTTGTAACTCATATCAGAAATCTCTTTCTGTCTACTCAAAATTGCCCCATAGCACAATGTCCTAGTCAAGTACAGGGTAGTTTGAAGAGTTCTTTATCTCAGTCAATATCCAATATGATGAATGTGGAGCATCATGATTTTAAAGAGATGAAGCCTCTCTATGGGAGGAAGTGTGAAGAAGGAAGTAGTGGCTGCAAAGATGTGAGGTTGGAATCAGAAAACAATGTCTCGTCATTTTTAAGTGACTTTATTACAGATAATGATTTAATATGTCCATCAGATAAAGTCAGAGTTGATTCTGCATGTTTTCCTTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAGTTGCATTGTGTGGATAATAACCAAAAAGGAGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCCCAACATGTTGAAAAGCCAAAGTTTGGTTCTGAGCCTTCTTACAATGATATGTCAAATGTGTTGAATTTCCCTGCTGGTTGTGAGCTACATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAAAGTTTTGATTGGCCAGCGCAGCTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATCAGCACCAGCCAATTGACTTCTGAATCTCGTCCTGAGCATCTTTTGGAAGCAATGGTGGCTAACATTAGCCACAGTAACAATGATGTTAATAGTGAATTATCGTTTTGTACATCAATGCAATCTGCAATGGCCTCAGCAAAAAATCATGAAGCTTCTACTCATAATGTGTATGCTATTAATTCAGAAGGTTATTCAATAGATCAGTTCTCTCTTGTCAAAGAGGACAAACACCATTCTCTGAGTTCATCATCAGGGATATGTGGTGTTATGTCCTCCAAAGGTGTTTCATCTACATTCCCCAGTTCAAGTAGTGGACAACTTGAAAGGTCATCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGACCCGGGGAAAGTTGTAGGCCGCGACCAAGGGACAGACAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGTTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCGCCATAAAGCACATGCTGTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAAGGTGGAACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGTATTCACAATAA 2004 0.4072 MGNNLHQVLRSLCFNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCQNILEQIGYGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVAPLGVIQLGSLNKQVIEDMGFVTHIRNLFLSTQNCPIAQCPSQVQGSLKSSLSQSISNMMNVEHHDFKEMKPLYGRKCEEGSSGCKDVRLESENNVSSFLSDFITDNDLICPSDKVRVDSACFPSAFLDTVVCETDKLHCVDNNQKGVLNFTQPSDANSQHVEKPKFGSEPSYNDMSNVLNFPAGCELHEALGPSFLKGSKSFDWPAQLNQDMKTVEMSDEISTSQLTSESRPEHLLEAMVANISHSNNDVNSELSFCTSMQSAMASAKNHEASTHNVYAINSEGYSIDQFSLVKEDKHHSLSSSSGICGVMSSKGVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVYSQ 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02090 667 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 481 530 IPR011598 GO:0046983
Viun1g02090 667 MobiDBLite consensus disorder prediction 472 496 - -
Viun1g02090 667 MobiDBLite consensus disorder prediction 457 471 - -
Viun1g02090 667 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
Viun1g02090 667 MobiDBLite consensus disorder prediction 457 496 - -
Viun1g02090 667 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 494 535 IPR036638 GO:0046983
Viun1g02090 667 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 185 664 IPR043561 GO:0003700|GO:0006355
Viun1g02090 667 MobiDBLite consensus disorder prediction 289 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02090 Viun-Chr1 32259346 32266114 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02090 322 662 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 49.030 2.36e-89 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02090 - - gmx:100798490 792.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02090 1 32259346 32266114 Viun1g02090 1 32259346 32266114 ECH
Viun1g02090 1 32259346 32266114 Viun7g01380 7 17164209 17170877 PCT