Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02089 ATGGGTAACAACTTGCACCAAGTACTCAGAAGCCTCTGTTTTAATACTCACTGGAACTACGCCATCTTTTGGAAGCTCAAACATCGTGCTCGAATGATCTTGACATGGGAGGACGCATACTATAACAATCCTGATGATTATGACTCTTCAGAAAATAAGCACTGCCAGAATATCTTGGAACAGATTGGTTATGGGAAATTTTCGCACAACGCATTAGGGTTAGCAGTGGCTAAGATGTCATATCATGCATATTCATTAGGAGAAGGTATTGTTGGACAGGTTGCTGTTACAGGAAAGCATAGGTGGATCTGTGCAGATAATCAGGTCGCAGGTTCTGGCTTGTCTTTTGAGTTTGCTGATGGGTGGCAGTCTCAGTTTTCTGCTGGAATCAGGACTATTGCTGTTGTTGCTGTAGCCCCACTTGGTGTTATTCAGCTTGGCTCTCTTAATAAACAGGTGATTGAAGATATGGGGTTTGTAACTCATATCAGAAATCTCTTTCTGTCTACTCAAAATTGCCCCATAGCACAATGTCCTAGTCAAGTACAGGGTAGTTTGAAGAGTTCTTTATCTCAGAAAATGTCTGATAACGTGGCCAAACAGGAGGGGCCTGAATTGTACAGTGATGAAAGTTCCATTTTGCTTCAGTCAATATCCAATATGATGAATGTGGAGCATCATGATTTTAAAGAGATGAAGCCTCTCTATGGGAGGAAGTGTGAAGAAGGAAGTAGTGGCTGCAAAGATGTGAGGTTGGAATCAGAAAACAATGTCTCGTCATTTTTAAGTGACTTTATTACAGATAATGATTTAATATGTCCATCAGATAAAGTCAGAGTTGATTCTGCATGTTTTCCTTCAGCTTTTCTTGATACAGTTGTTTGTGAAACTGATAAGTTGCATTGTGTGGATAATAACCAAAAAGGAGTGTTGAATTTCACCCAACCTTCAGATGCAAACTCCCAACATGTTGAAAAGCCAAAGTTTGGTTCTGAGCCTTCTTACAATGATATGTCAAATGTGTTGAATTTCCCTGCTGGTTGTGAGCTACATGAAGCACTTGGACCATCTTTTCTGAAAGGGAGTAAAAGTTTTGATTGGCCAGCGCAGCTTAATCAAGATATGAAAACTGTTGAAATGTCAGATGAGATCAGCACCAGCCAATTGACTTCTGAATCTCGTCCTGAGCATCTTTTGGAAGCAATGGTGGCTAACATTAGCCACAGTAACAATGATGTTAATAGTGAATTATCGTTTTGTACATCAATGCAATCTGCAATGGCCTCAGCAAAAAATCATGAAGCTTCTACTCATAATGTGTATGCTATTAATTCAGAAGGTTATTCAATAGATCAGTTCTCTCTTGTCAAAGAGGACAAACACCATTCTCTGAGTTCATCATCAGGGATATGTGGTGTTATGTCCTCCAAAGGTGTTTCATCTACATTCCCCAGTTCAAGTAGTGGACAACTTGAAAGGTCATCTGAACCATCTAAGAACAGCAAAAAGAGGGCCAGACCCGGGGAAAGTTGTAGGCCGCGACCAAGGGACAGACAATTAATCCAAGATCGTATTAAGGAGTTGAGAGAGTTGGTTCCAAATGGAGCAAAGTGCAGTATTGATTCCCTACTGGAGCGCGCCATAAAGCACATGCTGTTTCTCCAAAGCATAACTAAACATGCTGACAAGCTAACTGACTTTGGTGATACAAAGTCAAAGCTGCATCACATGGAAGCAGACATTCTTGGATCCTCTAGTTATGAGCAGGGCTCAAGCTGGGCAATGGAGGTAGGGGGTCATCTGAAAGTTCATTCAATATTAGTGGAGAATCTTAGCAAGAATGGACAGATGCTTGTTGAGATGCTGTGTGAGGAGTGCAGCCATTTTCTTGAAATAGCAGAAGCCATAAGAAGTTTGGGTCTTACCATTTTGAAAGGTGGAACTAAAGTTCATGGTGAAAAGATATGGATATGCTTTGTTGTCGAGGGTCAAAACAACAGAAATGTACACAGATTGGATATCTTGTGGCCGCTTGTTCAAATACTGCAATCCAAGAGCACGGTGTATTCACAATAA 2076 0.408 MGNNLHQVLRSLCFNTHWNYAIFWKLKHRARMILTWEDAYYNNPDDYDSSENKHCQNILEQIGYGKFSHNALGLAVAKMSYHAYSLGEGIVGQVAVTGKHRWICADNQVAGSGLSFEFADGWQSQFSAGIRTIAVVAVAPLGVIQLGSLNKQVIEDMGFVTHIRNLFLSTQNCPIAQCPSQVQGSLKSSLSQKMSDNVAKQEGPELYSDESSILLQSISNMMNVEHHDFKEMKPLYGRKCEEGSSGCKDVRLESENNVSSFLSDFITDNDLICPSDKVRVDSACFPSAFLDTVVCETDKLHCVDNNQKGVLNFTQPSDANSQHVEKPKFGSEPSYNDMSNVLNFPAGCELHEALGPSFLKGSKSFDWPAQLNQDMKTVEMSDEISTSQLTSESRPEHLLEAMVANISHSNNDVNSELSFCTSMQSAMASAKNHEASTHNVYAINSEGYSIDQFSLVKEDKHHSLSSSSGICGVMSSKGVSSTFPSSSSGQLERSSEPSKNSKKRARPGESCRPRPRDRQLIQDRIKELRELVPNGAKCSIDSLLERAIKHMLFLQSITKHADKLTDFGDTKSKLHHMEADILGSSSYEQGSSWAMEVGGHLKVHSILVENLSKNGQMLVEMLCEECSHFLEIAEAIRSLGLTILKGGTKVHGEKIWICFVVEGQNNRNVHRLDILWPLVQILQSKSTVYSQ 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02089 691 MobiDBLite consensus disorder prediction 313 332 - -
Viun1g02089 691 MobiDBLite consensus disorder prediction 481 520 - -
Viun1g02089 691 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 518 559 IPR036638 GO:0046983
Viun1g02089 691 MobiDBLite consensus disorder prediction 481 495 - -
Viun1g02089 691 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 185 688 IPR043561 GO:0003700|GO:0006355
Viun1g02089 691 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 505 554 IPR011598 GO:0046983
Viun1g02089 691 MobiDBLite consensus disorder prediction 496 520 - -
Viun1g02089 691 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 167 IPR025610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02089 Viun-Chr1 32259346 32266117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02089 346 686 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 49.030 4.11e-89 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02089 - - ccaj:109796613 1153.27