Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02079 ATGGACTTAAACTACCCACAACACCAACAAACCACTCACCATGATCTGGTTGGAACTGGCAGATCCTATGAATGCATCTTCTGCAAGAGAGGCTTCACCACAGCACAAGCCTTAGGTGGACACATGAACATACACAGAAAACAAAGGGCTAACAACAACAACACCAACATCAAACCTTCAACTTCTTCTAACAAAGTTGATGCAGATCTCCTACAACATCCAACCCAATCCACTGCTCTCACTGTTACACCTTCCCATGCTCAACTCTTTCTGCAGGATTGGAGGACCACAAATTTCACCTTCTACTCTAATCCATTGTCTTTTCATGAAATTAAGAACAAGCTTGAAGACACTCAAGAGAATGGTCTCGATTTGGAGCTCAGGTTGGGTCATCATCCATAG 402 0.4328 MDLNYPQHQQTTHHDLVGTGRSYECIFCKRGFTTAQALGGHMNIHRKQRANNNNTNIKPSTSSNKVDADLLQHPTQSTALTVTPSHAQLFLQDWRTTNFTFYSNPLSFHEIKNKLEDTQENGLDLELRLGHHP 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02079 133 ProSitePatterns Zinc finger C2H2 type domain signature. 25 45 IPR013087 -
Viun1g02079 133 PANTHER OS07G0101800 PROTEIN 16 132 - -
Viun1g02079 133 SUPERFAMILY beta-beta-alpha zinc fingers 21 49 IPR036236 -
Viun1g02079 133 Gene3D Classic Zinc Finger 3 78 - -
Viun1g02079 133 Pfam C2H2-type zinc finger 23 48 - -
Viun1g02079 133 ProSiteProfiles Zinc finger C2H2 type domain profile. 23 50 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02079 Viun-Chr1 32167502 32168189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02079 20 133 C2H2 Transcription Factor Family AT3G53820 35.938 2.57e-15 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02079 - - vun:114163022 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02079 1 32167502 32168189 Viun1g02079 1 32167502 32168189 ECH