Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02072 ATGCAGACATCACCCATGAGGACTTGTTCATTACATTTTCTCCACGCCTTCCCTCTTTCGCCTCTTTCGCTGTCCGACCCATCATTCACTATATATACACAAATCTTCAACACAAACATATCAAACAAATTACGATTCAAGATCAATCTAGTACACACTCAAAAGTTCACACCAAATTCGGATTTCGCAGTCACAAAACTTTCGAAAATGATTGAGATTCCTCTGAGTCTGGAGCATATAGCTCCTCTCTTCCTCTTCCTCTCTCTCGTTCTTCCCCTCATCTTCTTCTTCTTCTCCTCCTCACGTAACGATAACAAAGAGGCTGCTCCAACCAAACAACCCGTTACTATCCCAAAATCATACCCACTCATTGGCTCCTACTTAGCCCTCAAACGCATCGGCAACCGCCGTATTCAGTGGCTATCCGATGTAGTCCAAATCTCACCCGCCGCCACCTTCACCTTCCGCCGCCCACTGGGCCGCCTCCAAGTCTTCACTGGTAACCCCGCTACCGTGGAGCACATTCTCAAGACCCGCTTCTCCAACTACCAAAAGGGCTATTCCTTTATCAACACCCTCTCCGATTTCCTCGGCACCGGAATCTTCAACGCCGACGGCAACACGTGGAAGTTCCAAAGGCAAGTCGCCAGCCACGAATTCAACACAAAGTCTCTCCGCAAGTTTGTTGAACACGTGGTGGATGCCGAACTCTCCGACCACCTCCTCCCCATCATGGCTTCAGCGGCACAACAGGACCAGACCCTTGATTTCCAAGATATCCTCCAACGCTTCGCCTTCGATAACATCTGCAAAATCGCTTTTGGCTTCGACGCGGAGTACCTGGCGTCGTCAGGTGAACGGAGCAAGTTCGCGGTGGCGTACGAAGAAGCGACGGAGATAAGCAGCAAACGGTTCCGCGAACTGTTTCCGTTTGTGTGGAAAGTGAAGAGGGCATTGAACATAGGTTCGGAAAAGCGGTTGCGAATTGCAGTGAAAGAAGTGCACGAGTTCGCGAAGAACATAGTGAGAGAGAAGAAGAGGGAGCTGAAGGAGAAAGAATCGCTCGAATCGGTTGACATGCTTTCGCGGTTCTTGAGTTCAGGGCACTCTGATGAAGACTTTGTGACAGACATAGTCATAAGCTTCATATTGGCGGGGAAGGATACCACGTCAGCAGCGCTGACGTGGTTCTTCTGGCTGCTGTCGAAGAACCCTCGAGTGGAGAAGGAGATTGTGAAGGAGATAATGGAGAAATCGGAGGCTCCGGTGTACGATGAGGTGAAGCACATGCTTTACACGCATGCAGCGCTGTGCGAGAGCATGAGGCTGTACCCACCGGTGCCCATGGACACCAAGGAAGCAGTGGAGGATGACGTCTTGCCAGATGGGACGGTGGTGAAGAAGGGGACGCTGGTGACGTATCACGTGTACGCCATGGGGAGGTTGGAGAGTATTTGGGGTGAGGATTGGGCGGAGTTTAAGCCAGAGAGGTGGTTGGAGAAGCTTGAATCCGGAAAGTGGAAGTTTGTAGCAAAAGATTCTTTCACTTATCCTGTGTTTCAAGCTGGTCCCAGAATGTGTTTGGGGAAGGATATGGCTTTTATGCAGATGCAGAGTGTGGTGGCTGGGATTCTGCGGCGGTTCGCGGTTGTTCCCACGGTGGCCGAAGGGGTGGAGCCCAACTTCATTTCCTTCCTCTCCTCCCAGATGGAAGGTGGTTTTCCTGTCAAGATCATTGAGAGGGAAACCTCAAATTAA 1758 0.5074 MQTSPMRTCSLHFLHAFPLSPLSLSDPSFTIYTQIFNTNISNKLRFKINLVHTQKFTPNSDFAVTKLSKMIEIPLSLEHIAPLFLFLSLVLPLIFFFFSSSRNDNKEAAPTKQPVTIPKSYPLIGSYLALKRIGNRRIQWLSDVVQISPAATFTFRRPLGRLQVFTGNPATVEHILKTRFSNYQKGYSFINTLSDFLGTGIFNADGNTWKFQRQVASHEFNTKSLRKFVEHVVDAELSDHLLPIMASAAQQDQTLDFQDILQRFAFDNICKIAFGFDAEYLASSGERSKFAVAYEEATEISSKRFRELFPFVWKVKRALNIGSEKRLRIAVKEVHEFAKNIVREKKRELKEKESLESVDMLSRFLSSGHSDEDFVTDIVISFILAGKDTTSAALTWFFWLLSKNPRVEKEIVKEIMEKSEAPVYDEVKHMLYTHAALCESMRLYPPVPMDTKEAVEDDVLPDGTVVKKGTLVTYHVYAMGRLESIWGEDWAEFKPERWLEKLESGKWKFVAKDSFTYPVFQAGPRMCLGKDMAFMQMQSVVAGILRRFAVVPTVAEGVEPNFISFLSSQMEGGFPVKIIERETSN 585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02072 585 CDD CYP86A 152 574 - -
Viun1g02072 585 PRINTS E-class P450 group I signature 527 550 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PRINTS E-class P450 group I signature 434 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PRINTS E-class P450 group I signature 517 527 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PRINTS E-class P450 group I signature 374 391 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PRINTS E-class P450 group I signature 394 420 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 Coils Coil 335 358 - -
Viun1g02072 585 SUPERFAMILY Cytochrome P450 118 581 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 Pfam Cytochrome P450 118 563 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PANTHER CYTOCHROME P450 101 576 - -
Viun1g02072 585 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PRINTS P450 superfamily signature 385 402 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PRINTS P450 superfamily signature 527 538 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 PRINTS P450 superfamily signature 518 527 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g02072 585 Gene3D Cytochrome P450 102 585 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02072 Viun-Chr1 32065458 32067567 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02072 77 585 Cytochrome P450 AT5G63450 45.914 1.43e-152 448
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02072 K20769 K13407 gmx:100818199 827.78