Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02066 ATGCCATCATTCTCTCATCCTCTTCCTCACTTCCACCACATGGCTCTTTCTGCTTCTCTGCTCCAACTTCAACCCTCTTCACTAAAGAAAAAAACCGCTGTTTCCAGAAGTTGGGTTCTGCTCGACCACCATGGCAAACCCACTGTGCTCGATGCAGATAAGCATGCCATCATGCGCCTGGTTAAAATTCACGCCAGGGATCTTCGGATTCTCGATCCTCTCTTATCCTATCCCTCCACCATTTTGGGCAGAGACAAAGTCATTGTTCTCAATCTAGAGCACATTAAAGCTATCATCACTGCAGATGAGGTGTTGCTAAGAGACCCAACTGATGATGACGTTGTGCCAATTGTTGAAGAGCTTCGACGACGGTTACCTAAAGTAAGTGCTTCTGGGGAAGGCCGAGGAGAAGAAGAGACGTGTGCTCAAGATGGTGAAGGTGGAGACGAAAATGAATTTCCATTTGAGATACGGGCTTTGGAAGTTTTATTTGAAGCAATTTGTAGTTTCCTTGACGCACGAACGAGAGAGTTAGAGACTGCTGCTTATCCAGCTTTGGACGAACTTACCTCAAAGATTAGCAGTCGTAATTTGGATAGAGTGAGAAAATTGAAATGTGCCATGACGAGGCTGACAAGTCGTGTTCAAAAGATTAGAGATGAACTAGAAAACCTACTTGATGATGACGACGACATGGCTGATCTTTACTTATCAAGAAAGTCGACCGTTTCATCATCTCCAACAAGTAGCTCTGATGCTCCCAAGTGGCTTTATGGTTCTCCAAATACAGGTTCAAGAATACACAAATCAAGCAGAGCAAGTGGAACAACAGTTCACAGGGACGATGATGTTGAGGAGCTTGAAATGTTACTGGAGGCCAATTTCATGCAAATTGACGGCACATTAAATAAATTGGCCACATTGCGAGAATACATCGATGACACAGAAGATTACATCAACATACAGCTTGACAATCACCGAAACCAGCTGATTCAGCTGGAGCTCTTCATCAGTGCCGGCACTGTGTGTATGTCCTTATATTCATTGGTGGCTGCAATATTTGGTATGAACATTCCATACACATGGAAATCACCAGGCCACGAACATGTGTTTAAATGGGTGGTGATCTTTGCGGGAATGGTTTGTGCATCCTTGTTTTTATCTATAGTATCTTATGCCCGACGCAAAGGCCTTGTTGGGTCTTGA 1206 0.4403 MPSFSHPLPHFHHMALSASLLQLQPSSLKKKTAVSRSWVLLDHHGKPTVLDADKHAIMRLVKIHARDLRILDPLLSYPSTILGRDKVIVLNLEHIKAIITADEVLLRDPTDDDVVPIVEELRRRLPKVSASGEGRGEEETCAQDGEGGDENEFPFEIRALEVLFEAICSFLDARTRELETAAYPALDELTSKISSRNLDRVRKLKCAMTRLTSRVQKIRDELENLLDDDDDMADLYLSRKSTVSSSPTSSSDAPKWLYGSPNTGSRIHKSSRASGTTVHRDDDVEELEMLLEANFMQIDGTLNKLATLREYIDDTEDYINIQLDNHRNQLIQLELFISAGTVCMSLYSLVAAIFGMNIPYTWKSPGHEHVFKWVVIFAGMVCASLFLSIVSYARRKGLVGS 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02066 401 Coils Coil 201 228 - -
Viun1g02066 401 MobiDBLite consensus disorder prediction 128 142 - -
Viun1g02066 401 CDD Mrs2_Mfm1p-like 38 398 IPR039204 -
Viun1g02066 401 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 25 399 IPR039204 -
Viun1g02066 401 Gene3D - 20 109 - -
Viun1g02066 401 MobiDBLite consensus disorder prediction 128 149 - -
Viun1g02066 401 Gene3D Magnesium transport protein CorA, transmembrane region 117 330 - -
Viun1g02066 401 Pfam CorA-like Mg2+ transporter protein 289 387 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Viun1g02066 401 FunFam Magnesium transporter MRS2-1 26 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02066 Viun-Chr1 31977564 31981487 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02066 14 374 MRS2 Gene Family AT5G64560 70.732 4.58e-159 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02066 K16075 - gmx:100799368 662.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02066 1 31977564 31981487 Viun1g02066 1 31977564 31981487 ECH