Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02058 ATGGAGGTTGGCCTCAACAACGACAACATGGCCTTTGAGGAAACTGAACTAAGGCTTGGACTCCCTGGAGGAAACGCTGAAGAACTTCTAAGGAAGCGAGGTTTCTCTGAGACTCAAACTCAGGATCACACTGCCACCGTAGATTTGATGCTTAATCTTTCATCCAAGGAACCAGCCCCTGGACCAGATCCATCTCATAAACACAGCGACAACACCCTTCTCCCTGCAGATCCTGCTAAGCCTCCAGCCAAGGCACAGGTGGTGGGTTGGCCACCTGTGCGGTCGTTCCGGAAGAACATGTTAGCTGTGCAAAAGAGCATTGGAGAAGAGAGTGAGAAGAATAACAGCCCTAATGCAAGCTTTGTGAAAGTTAGCATGGATGGAGCACCTTATCTCCGCAAAGTGGACTTGAAGATGTATAAGAGTTACCGCGAGCTCTCTGATTCTTTAGGAAAAATGTTCAGCTCCTTCACCATTGGGAATTGTGAATCCCAAGGAATGAAGGATTTCATGAATGAGAGCAAACTGATGGATCTTTTGAACAGCTCTGATTATGTCCCAACCTATGAGGACAAGGATGGTGACTGGATGCTTGTCGGTGATGTTCCATGGGAGATGTTTGTTGAATCATGCAAGCGTTTACGCATCATGAAAGGAAAGGAGGCTATTGGTCTTGGTCTTGCACCAAGAGCCATGGCAAAAAGCAAGAACAGGAGCTAG 720 0.4722 MEVGLNNDNMAFEETELRLGLPGGNAEELLRKRGFSETQTQDHTATVDLMLNLSSKEPAPGPDPSHKHSDNTLLPADPAKPPAKAQVVGWPPVRSFRKNMLAVQKSIGEESEKNNSPNASFVKVSMDGAPYLRKVDLKMYKSYRELSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMKGKEAIGLGLAPRAMAKSKNRS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02058 239 Gene3D - 113 230 - -
Viun1g02058 239 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 224 IPR003311 GO:0005634|GO:0006355
Viun1g02058 239 Pfam AUX/IAA family 14 226 IPR033389 -
Viun1g02058 239 ProSiteProfiles PB1 domain profile. 119 219 IPR000270 GO:0005515
Viun1g02058 239 FunFam Auxin-responsive protein 114 230 - -
Viun1g02058 239 MobiDBLite consensus disorder prediction 30 87 - -
Viun1g02058 239 SUPERFAMILY CAD & PB1 domains 109 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02058 Viun-Chr1 31909433 31912005 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02058 112 222 B3 DNA Binding Superfamily AT3G61830 33.333 1.60e-09 55.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Viun1g02058 AUX_IAA 1.2e-81 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02058 K14484 - gmx:100810013 392.119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02058 1 31909433 31912005 Viun1g02058 1 31909433 31912005 ECH