Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02057 ATGGGGAGCTATGAAACTGAGCTGAATCTTAGCGCCACAGAGTTGAGGTTGGGATTGCCCGGGACTGATGAACCTCAAGAGAAACGTCCATGCAGTGGCTCTGTTATCAGAAGCAGCAACAAGAGATCTTCACAAGAATTGGAAGAGTCCAGGTGCAAAAGCAACGTTAACTCTGATACTTCGGATTCCACAACCACAAGTGATCACGACCAAGACAGTGTCCAACCTGCAAAAGTACAAGTAGTGGGATGGCCACCAATTAGATCTTTTAGGAAGAACAGTCTGCAACAGAAGAAGGTGGAGCAGGGCGATGGAACTGGAATGTACGTAAAAGTCAGCATGGCTGGTGCACCTTACTTGAGGAAGATAGATCTCAAGGTTTACACAAGCTACCCAGAACTCCTCAAGGCCTTGCAAAATTTGTTCAAGTGCACATTTGGTGAATACTCAGAAAGGGAAGGATACAACGGATCTGAATACGCTCCTACTTATGAAGACAAGGATGGTGACTGGATGCTGGTTGGAGATGTTCCATGGAACATGTTTGTATCCTCCTGCAAGAGGCTGAGAATAATCAAAGGATCAGAGGCAAAGGGGCTGGGTTGTTTATGA 612 0.4608 MGSYETELNLSATELRLGLPGTDEPQEKRPCSGSVIRSSNKRSSQELEESRCKSNVNSDTSDSTTTSDHDQDSVQPAKVQVVGWPPIRSFRKNSLQQKKVEQGDGTGMYVKVSMAGAPYLRKIDLKVYTSYPELLKALQNLFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFVSSCKRLRIIKGSEAKGLGCL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02057 203 MobiDBLite consensus disorder prediction 56 74 - -
Viun1g02057 203 FunFam Auxin-responsive protein 102 203 - -
Viun1g02057 203 ProSiteProfiles PB1 domain profile. 107 199 IPR000270 GO:0005515
Viun1g02057 203 Gene3D - 102 203 - -
Viun1g02057 203 SUPERFAMILY CAD & PB1 domains 103 191 - -
Viun1g02057 203 MobiDBLite consensus disorder prediction 1 78 - -
Viun1g02057 203 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 8 198 IPR003311 GO:0005634|GO:0006355
Viun1g02057 203 Pfam AUX/IAA family 13 201 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02057 Viun-Chr1 31899032 31900341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02057 39 200 B3 DNA Binding Superfamily AT2G46530 30.247 4.36e-13 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Viun1g02057 AUX_IAA 2.3e-59 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02057 K14484 - gmx:100792134 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02057 1 31899032 31900341 Viun1g02057 1 31899032 31900341 ECH