Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02053 ATGACAACAAAACCTACGTGGCAGAAACTAAGTACCTTCGATCTTCGGATTCCGAGGGAAGGAGCAAACCCTAACATGGAGTCGCACGGCGGAGGCCCCCTTCGTTCTCGCAGTTCCCAGTCCCCTTCTCCTTCCCACTCCGCCTCAGCCTCCGCCACATCCTCAATCCACAAGCGCAAACGCGCGTCCGAGGACCACGCGCCTCCCTTCCCTCCCTCCTCTTTCTCCGCCGACACTCGCGACGGTGCCCTCACCTCCAATGACGACCTGGAGAGCATCTCCGCCCGAGGCGCCGACTCCGACTCAGACGACGACTCCGAGGACGCCGTCGTCGACGATGACGAGGAGGACTACGACAATGACTCCTCCATGCGCACCTTCACCGCCTCCAGACTCGGTAACCCTCCCTCCGCTCCCCGTAATACCAAGCTCAAGACTGATAACTCCGCTGTAAAAATTGAGAACTCCGACGGCGCAAAAGATGCCGCAAATGCCGGAGCTGGTGCCATGGAGGTAGTTGGATCCGTCCCTGGCATTGTGGTTAAGGAGGACCCGACTAAGATTTTTACAGATAATTTGCAAACGAGTGGGGCTTATACAGCTCGGGAAGAGAGTCTCAAGAAGGAGGAGGAAGCGGGAAGGCTTAAATTCGTATGCCATTCAAACGATGGTGTTGATGAGCATATGGTTTGGTTGATTGGATTGAAGAATATATTTGCTAGACAACTTCCCAATATGCCGAAGGAGTACATTGTTCGACTTGTCATGGATAGGAGCCACAAGTCTGTAATGGTCATAAGGCGTAATCACGTTGTTGGAGGCATTACATATCGCCCATATGCTAGCCAGAAGTTTGGTGAGATAGCCTTTTGTGCAATTACAGCTGATGAGCAAGTAAAGGGTTATGGTACCAGATTGATGAATCACTTAAAACAGTATGCACGTGATGTGGATGGGCTGACACATTTTCTCACATATGCTGACAACAATGCTGTTGGCTATTTTATCAAACAGGGATTTACAAAGGAGATTCACTTGGAGAAAGATCGATGGCAAGGTTATATAAAGGATTACGATGGAGGAATTTTGATGGAATGCAAGATAGATCCAAAGCTCCCTTACACTGATTTGTCAACTATGATCCGTCGTCAAAGACAGGCTATTGATGAAAAAATCAGAGAGCTGTCAAACTGTCACATAGTCTATGCTGGAATTGATTTTCAGAAGAAAGAAGCGGGCATTCCTAAAAAAATTATTGATGACATCCCCGGTTTGAGAGAGGCTGGATGGACTCCTGATCAGTGGGGTCATTCTCGATTCAGAAGTCTAAATGTCTCTACTGACAATACTACTAATCAAAAACATTTGTCTGGTTTTATGCGATCACTTCTAAAGTCTATGCTTGATCACGCCGACGCATGGCCATTCAAGGAGCCAGTTGATGCACGGGATGTCCCTGACTATTATGACATCATCAAAGATCCAATGGATTTGAAGACAATGTCTAAGAGGGTGGAATCAGAGCTATATTATGTAACATTTGAGATGTTTGTTGCCGATGTCAGAAGAATGTTTGCAAATGCACGCACCTATAATTCTCCAGAAACCATTTATTACAAATGTGCTACAAGGTTAGAATCCCACTTTCAAAGCAAAGTACAAGCGGGTCTTCAGTCTGGCTCAAAAATTCAGTAG 1695 0.4696 MTTKPTWQKLSTFDLRIPREGANPNMESHGGGPLRSRSSQSPSPSHSASASATSSIHKRKRASEDHAPPFPPSSFSADTRDGALTSNDDLESISARGADSDSDDDSEDAVVDDDEEDYDNDSSMRTFTASRLGNPPSAPRNTKLKTDNSAVKIENSDGAKDAANAGAGAMEVVGSVPGIVVKEDPTKIFTDNLQTSGAYTAREESLKKEEEAGRLKFVCHSNDGVDEHMVWLIGLKNIFARQLPNMPKEYIVRLVMDRSHKSVMVIRRNHVVGGITYRPYASQKFGEIAFCAITADEQVKGYGTRLMNHLKQYARDVDGLTHFLTYADNNAVGYFIKQGFTKEIHLEKDRWQGYIKDYDGGILMECKIDPKLPYTDLSTMIRRQRQAIDEKIRELSNCHIVYAGIDFQKKEAGIPKKIIDDIPGLREAGWTPDQWGHSRFRSLNVSTDNTTNQKHLSGFMRSLLKSMLDHADAWPFKEPVDARDVPDYYDIIKDPMDLKTMSKRVESELYYVTFEMFVADVRRMFANARTYNSPETIYYKCATRLESHFQSKVQAGLQSGSKIQ 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02053 564 MobiDBLite consensus disorder prediction 123 150 - -
Viun1g02053 564 ProSitePatterns Bromodomain signature. 473 531 IPR018359 -
Viun1g02053 564 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 230 374 IPR016181 -
Viun1g02053 564 FunFam Histone acetyltransferase KAT2A 212 376 - -
Viun1g02053 564 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 222 369 IPR000182 GO:0016747
Viun1g02053 564 PANTHER GH11602P 51 561 IPR037800 GO:0004402
Viun1g02053 564 MobiDBLite consensus disorder prediction 1 150 - -
Viun1g02053 564 MobiDBLite consensus disorder prediction 101 120 - -
Viun1g02053 564 SMART bromo_6 449 558 IPR001487 GO:0005515
Viun1g02053 564 Pfam Acetyltransferase (GNAT) family 262 340 IPR000182 GO:0016747
Viun1g02053 564 Gene3D - 437 561 IPR036427 GO:0005515
Viun1g02053 564 MobiDBLite consensus disorder prediction 32 56 - -
Viun1g02053 564 CDD Bromo_gcn5_like 459 555 - -
Viun1g02053 564 MobiDBLite consensus disorder prediction 78 93 - -
Viun1g02053 564 PRINTS Bromodomain signature 471 484 IPR001487 GO:0005515
Viun1g02053 564 PRINTS Bromodomain signature 520 539 IPR001487 GO:0005515
Viun1g02053 564 PRINTS Bromodomain signature 485 501 IPR001487 GO:0005515
Viun1g02053 564 SUPERFAMILY Bromodomain 443 554 IPR036427 GO:0005515
Viun1g02053 564 Gene3D - 211 375 - -
Viun1g02053 564 ProSiteProfiles Bromodomain profile. 468 539 IPR001487 GO:0005515
Viun1g02053 564 CDD NAT_SF 262 316 - -
Viun1g02053 564 Pfam Bromodomain 461 543 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02053 Viun-Chr1 31865855 31873445 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun1g02053 Bromodomain 2.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02053 K06062 - gmx:100791610 941.028