Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02049 ATGGAAAACATAGCAAAAAAGAGATGGCGTTTAGCTTATACAGCAATTTATTCTAGGCGAGTCATGCTTGCCTTGGCCAAAGAAGTCATGTCTAAGACAAATACAAACACTCATCCTTCTTTGGTTCCTGATGTTGACAAGGTGAGGATTACGAGTATGGTCAAGGACAAAAACTTGTCAGCCTTTACAGAGTTTGGAGGAGTTGAAGGTGTTGCAAACATTCTTGGAACCATTCCGGAAAAGGGAATCACCGGAAGCCATGATGAGGTTGCTAAACGTGTTAAAGTATTTGGTTCCAACACTTACCAGAGGCCACCGCCTAAGTCTTTCCTGAGTTTTGTGGTGGAAGCTTTCACTGACACTAATATTCTGATCCTTGTTTGCGCCGGTCTTTCCCTTGGTTTTGGCATGAAAGAACATGGCCCGGGGGAAGGCTGGTATGAAGGAGGGAGTATATTTGTAGCAGTGTTTCTGGTGGTGGTTGTTACCGCACTCAGCAACCTCAGACAAGAGAGACAGTTTCACAAATTGTCTAAGGTAAGCAACGACATCAAAGTAGAAGTAGTGAGAAATGGAAGGAGACAGAATATATCTATCTTTGATGTTGTAGTGGGCGATATTGCATCCCTTAAGATTGGTGATCAGATTCCAGCTGATGGATTGTTCTTGAGTGGCCTTTGTTTGCTAGTGGATGAATCAAGTATGACAGGTGAGAGCGACCCTGTAGAAATTGAGCCTTCAAGAAGCCCCTTCTTGCTGTCTGGTGCAAAAGTTGAGGATGGCTGTGGTCGTATGCTAGTGACATCTGTGGGAATCAACACAGCATGGGGTGAAATAATGAGCTCACTATCGACAGACACCGAAGTAAGGACACCATTACAGACTCGCCTTGATAAGTTAACCTTTTCTGTCGGAAGGGTGGGTCTCACAGTCGCTTTTCTTGTTCTCAGAGTCTTGTTATTTCGTTATTTCACTGGAAACACACAGGATGATAATGGGAATACAGAGTTCCAGGGGAGTAAAACTGATGTAAACGACATTTTCAATGCGGTTGTGAGGATTGTCGCCGCTGCAGTCACTATTGTGGTGGTGGCAATCCCAGAAGGTCTGCCATTGGCCGTCACTCTCACTCTTGCTTACTCCATGAAAAGAATGATGTCAGACCATGTAATGGTGAGGGAGATTTCTGCTTGCGAAACCATGGGGTCAGTTACAGTTATCTGCACGGATAAAACTGGTACCCTGACTTTGAATCAAATGAGAGTCACCAAGTTTTGGCTTGGCCCACAAAATGTCGAGGAAAAATCTTCCAATGCAATGGCCCCTGAAGTTCTTGAGTTATTCCAACAAGGAGTTGGCCTAAACACAACTGGCAGTATCTGTAAACCTTCACCAATATCTGAACCTGAAATTTCTGGTAGCCCGACGGAGAAAGCTATACTCTTGTGGGCCGTGTCAGATTTGGGCATGGACATGGATGAACTGAAGCGCGCACACGAAGTTCTCCATGTTGAAGCGTTTAACTCTGAAAAGAAACGAAGTGGCATCGCGATAAGGAAGAAGACTACCAACACAGTTCACGCTCATTGGAAAGGTGCTGCAGAGATTATTCTCGGGATGTGTTCAAATTATATTGACAATAACGGCATAGAGAAGCCCCTTGATGAAGAGCGGAGCAAATTGCAAAATATAATTGAAGGCATGGCTGCTAGCAGCCTTAGATGTATCGCTTTTGCTCACACGCAGATTCCGGAAGATATTGATTATAACGATAAGGAGAAAGCAGATGAAATCCTGAGAAAAGATGGCTTGACCTTGCTAGGTATTGTTGGCCTCAAGGATCCATGCCGACCCGACGCCAAGGAGGCTGTGGAAGCGTGTAAACATGCTGGAGTTAGTGTGAAGATGATCACAGGTGATAACATATTCACTGCAAAAGCAATAGCAGCAGAATGCGGAATATTAGACTTTGATGGCCATGTGAGCACGGAAGAAGTGGTGGAGGGTGTGGAATTCAGGAATTATTCTGAGGAAGAGAGAATGGAGAGAGTAGAGAAGATCCGCGTGATGGCAAGATCATCCCCTTTTGACAAAAGTTTGATGGTGCAGTGCTTGAAAAGGAAAGGTCATGTTGTTGCAGTGACAGGAGATGGCACAAATGATGCACCTGCTCTGATAGAAGCTGACATTGGACTTGCTATGGGGATCCAAGGAACTGAAGTTGCCAAGGAGAGTTCCGACATTGTCATCTTAGATGACAACTTCAGTTCTATTGTGACTGTTGTAAGGTGGGGGCGATGTGTTTACAACAATATCCAAAAGTTCATCCAGTTTCAACTAACCGTGAATGTCGCAGCTCTAGTGATAAATTTTATTGCAGCAGTTTCTTCGAGAGATGTTCCCCTAACAACAGTTCAACTTTTATGGGTAAATCTGATTATCGGTACGCTAGGAGCATTGGCACTGGCTGCAGAAAGACCTACAAAAGAGTTAATGGAGAAAAAATCAGTGGGTAGGACTGAGCCTCTTATTACCAATATTATGTGGAGAAACCTTTTCGCTCAAGCTTTATATCAGATTGTTATCCTCCTGGTTTTACAATTGAAGGGAGAGTTAATCTTCAATGTTAGAGAGGAGGTAAAGGATACTCTAATCTTTAATACTTTTGTCCTCTGCCAAGTATTCAACGAGTTCAACTCTAGAAGTATGGAGAAACTTAATGTGTTCCAAGGCCTTCACAGAAACCACCTGTTTCTTGGACTTGTGGGGATTACCCTTGTTCTTCAAGTTGCGATGGTGGAACTCCTTAGGATGTTTGCTGGTACAGAGAGATTAACATGGGAGCAATGGGGAATTTGTATTGGAATTGCAGCTGTGTCATGGCCAATTGCTTGGGTTACAAAGCTCATACCAGTTTCAGATAAACCCTTCTTCAACCACGTTAAGTGTGTAAAATTATTGGTCTCCAAGATTAAGGATTGTGTATAA 2988 0.4357 MENIAKKRWRLAYTAIYSRRVMLALAKEVMSKTNTNTHPSLVPDVDKVRITSMVKDKNLSAFTEFGGVEGVANILGTIPEKGITGSHDEVAKRVKVFGSNTYQRPPPKSFLSFVVEAFTDTNILILVCAGLSLGFGMKEHGPGEGWYEGGSIFVAVFLVVVVTALSNLRQERQFHKLSKVSNDIKVEVVRNGRRQNISIFDVVVGDIASLKIGDQIPADGLFLSGLCLLVDESSMTGESDPVEIEPSRSPFLLSGAKVEDGCGRMLVTSVGINTAWGEIMSSLSTDTEVRTPLQTRLDKLTFSVGRVGLTVAFLVLRVLLFRYFTGNTQDDNGNTEFQGSKTDVNDIFNAVVRIVAAAVTIVVVAIPEGLPLAVTLTLAYSMKRMMSDHVMVREISACETMGSVTVICTDKTGTLTLNQMRVTKFWLGPQNVEEKSSNAMAPEVLELFQQGVGLNTTGSICKPSPISEPEISGSPTEKAILLWAVSDLGMDMDELKRAHEVLHVEAFNSEKKRSGIAIRKKTTNTVHAHWKGAAEIILGMCSNYIDNNGIEKPLDEERSKLQNIIEGMAASSLRCIAFAHTQIPEDIDYNDKEKADEILRKDGLTLLGIVGLKDPCRPDAKEAVEACKHAGVSVKMITGDNIFTAKAIAAECGILDFDGHVSTEEVVEGVEFRNYSEEERMERVEKIRVMARSSPFDKSLMVQCLKRKGHVVAVTGDGTNDAPALIEADIGLAMGIQGTEVAKESSDIVILDDNFSSIVTVVRWGRCVYNNIQKFIQFQLTVNVAALVINFIAAVSSRDVPLTTVQLLWVNLIIGTLGALALAAERPTKELMEKKSVGRTEPLITNIMWRNLFAQALYQIVILLVLQLKGELIFNVREEVKDTLIFNTFVLCQVFNEFNSRSMEKLNVFQGLHRNHLFLGLVGITLVLQVAMVELLRMFAGTERLTWEQWGICIGIAAVSWPIAWVTKLIPVSDKPFFNHVKCVKLLVSKIKDCV 995
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02049 995 SFLD p-type atpase 390 768 IPR044492 -
Viun1g02049 995 PRINTS H+-transporting ATPase (proton pump) signature 715 731 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun1g02049 995 PRINTS H+-transporting ATPase (proton pump) signature 747 772 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun1g02049 995 PRINTS H+-transporting ATPase (proton pump) signature 561 579 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun1g02049 995 FunFam Calcium-transporting ATPase 418 615 - -
Viun1g02049 995 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 415 612 IPR023299 GO:0000166
Viun1g02049 995 PANTHER CATION TRANSPORTING ATPASE 37 973 - -
Viun1g02049 995 ProSitePatterns E1-E2 ATPases phosphorylation site. 410 416 IPR018303 -
Viun1g02049 995 Gene3D - 418 615 IPR023299 GO:0000166
Viun1g02049 995 FunFam Calcium-transporting ATPase 610 760 - -
Viun1g02049 995 SUPERFAMILY HAD-like 406 819 IPR036412 -
Viun1g02049 995 SUPERFAMILY Calcium ATPase, transduction domain A 184 282 IPR008250 -
Viun1g02049 995 Pfam haloacid dehalogenase-like hydrolase 405 729 - -
Viun1g02049 995 SFLD Haloacid Dehalogenase 390 768 - -
Viun1g02049 995 FunFam Calcium-transporting ATPase 732 974 - -
Viun1g02049 995 NCBIfam HAD-IC family P-type ATPase 349 441 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun1g02049 995 NCBIfam HAD-IC family P-type ATPase 685 795 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Viun1g02049 995 Gene3D - 116 969 - -
Viun1g02049 995 Gene3D - 405 760 IPR023214 -
Viun1g02049 995 FunFam Calcium-transporting ATPase 162 284 - -
Viun1g02049 995 Pfam Cation transporter/ATPase, N-terminus 66 131 IPR004014 -
Viun1g02049 995 Gene3D - 86 284 - -
Viun1g02049 995 NCBIfam calcium-translocating P-type ATPase, PMCA-type 43 972 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Viun1g02049 995 SUPERFAMILY Calcium ATPase, transmembrane domain M 65 972 IPR023298 -
Viun1g02049 995 Pfam E1-E2 ATPase 184 386 - -
Viun1g02049 995 PRINTS P-type cation-transporting ATPase superfamily signature 408 422 - -
Viun1g02049 995 PRINTS P-type cation-transporting ATPase superfamily signature 231 245 - -
Viun1g02049 995 PRINTS P-type cation-transporting ATPase superfamily signature 608 619 - -
Viun1g02049 995 PRINTS P-type cation-transporting ATPase superfamily signature 630 640 - -
Viun1g02049 995 PRINTS P-type cation-transporting ATPase superfamily signature 739 751 - -
Viun1g02049 995 PRINTS P-type cation-transporting ATPase superfamily signature 715 734 - -
Viun1g02049 995 Pfam Cation transporting ATPase, C-terminus 800 970 IPR006068 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02049 Viun-Chr1 31830136 31833407 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02049 5 982 Primary Pumps ATPases AT3G63380 65.837 0.0 1276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02049 K01537 - gmx:100790034 1579.3