Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02044 ATGGGTCTGGAAAAGAATCTTCGTGTATTTTTTGATGTGTCAATTGATGCGGACCCCGTGGAAAGAATTGTTATTCAGCTTTTTGATAATATTGTTCCAAAGACAGCCGAGAATTTTCGGGCGCTCTGTACAGGTGAGAAGGGCATTGGAGAATCAACTGGGAAACCTTTGCATTATAAGGGAACAAGCTTTCATCGTATAATTAGAGGTTTCATGGCTCAAGGTGGTGATTTTTCAAGGGGTAATGGCACCGGTGGGGAAAGTATATATGGTGGAAAATTTGCAGATGAAAATTTCAAACTAAGACATGATGGACCTGGTTTTCTTTCTATGGCTAATAGTGGTCCTAATACAAATGGATCTCAGTTTTTTATTACATTCAAGCGCCAACCACATCTTGATGGGAAACATGTTGTTTTTGGAAAAGTTGTCAATGGATTGGATGTTCTGAAGAAAATTGAGCTGGCAGGAACATCTGACGGTAAACCTACCCAGACAGTTAAAATTGTTGATTGCGGTGAAGTTCCTGCAACTGAAACAAAAACTCAGCATACTGTTGAGAAGGAAAAAGGGAAAAGGAGAAAATCAGGGAAAACCCTTACTTCTGATGATAGTTCCGAGTCTTCTGACAAAAAGTCAAGGGGGAAAAGAAAAAAATCTTCCAAAGACACGAGGAAAAAAAGGAAAAGATACTCAACATCTGATAGTGATAGTTATTCCTCAGATTCTGAGTCAGATTCAGCTTCTGATTCTGAATCAGATTCATCTGATTCTGATTCTAGTTCTTCTAGTTATGGGAAACACCAGAAGAGGAAAAATAAGCGCAGGCATGGGAAGAAGAGGAAATTTGGACGAAAGCAGAGCAAGAGAAGCAGGCACAGTCGAAGTAGAAGATCAAAGCACAAATCTTGGCGTTATGATGATTCAAGTGATAGCTCTAGTGGTAGCAGCAGCAGTAGTTCTGGTGATGAGAAAACTGATCGTCGCTCCTCAATTCGTAAAAGACATGTTGACAATAAAGCACAAAGAAATCAAGACACAGAAAAGCAATCTTCTAGCCTTCCTCGGCAAGATCAAATTATTCCAGAGCAAACAACGGATACCGAGGTTAGAAGAACTGTGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATGGGGCATTTGTGAATAATGGGCATGATACTAAAGCTGAATTTAGTGAACCTGCTAAGCAACATGCTAATTCAGAGGATTCAAATGACAATAGAAGTGCAAGAACTGGGAGAAGTCCTACCAGGGATTCTGGTGAGCTAAACCAGGGACGTGCTTTGTTGCTGGCTAGTTCTGGTCAAAAGGCATCTGAACCTGCTGCCCCTAAACATGGTCAGGGCTTTTCAAAAAGCCCTTCACCAAATGGCACGCCTAGGCGTATTAAAAAAGGACGTGGCTTTACTGAGCGTTATGCCTTTGCACGCAGATATCGTACTCCATCTCCTGAGCGATCACCGCGTGCATATAGGTATGGTGATAGAAATATAAGAAGGAACTTTGATAGAAACACAAGCTACAGAAGTTATTCTGAGCGCTCTCCACCACGACGTTATCGAAGCCCACCTGGGGGCAGAAATCGTCCAAGATACCAAAGCAGGAGAAGTGTCAGTAGGAGCATCTCTCGCAGTCCAGTGCGTGGGCGTTTTAGAGACCGTGACCGGAGTCGGAGCCCAAGACGTAGTGTTAGTCCTGAAGACAGGCGGCCTCCAATAAGTGACAGATTAAAATCCCGACTTGGTCCAAGAAGTGATGAACGATTGGCAGACAGAAGGGGGAGGTCAAAGTCCAATTCTAGGAGCAGTGGCTCATCTCGGTCCAGATCCCCTGATGCTACACCACCAAAACGATATGATAAAAGGACTTCCCTATCTCGTAGCAGGTCTAGGTCCAGCTCTTCTTCCGGTCAGAAGGGTTTAGTTTCTTATGGAGATGCTAGTCCTGATTCTGCAGTAAGGTAA 1998 0.4324 MGLEKNLRVFFDVSIDADPVERIVIQLFDNIVPKTAENFRALCTGEKGIGESTGKPLHYKGTSFHRIIRGFMAQGGDFSRGNGTGGESIYGGKFADENFKLRHDGPGFLSMANSGPNTNGSQFFITFKRQPHLDGKHVVFGKVVNGLDVLKKIELAGTSDGKPTQTVKIVDCGEVPATETKTQHTVEKEKGKRRKSGKTLTSDDSSESSDKKSRGKRKKSSKDTRKKRKRYSTSDSDSYSSDSESDSASDSESDSSDSDSSSSSYGKHQKRKNKRRHGKKRKFGRKQSKRSRHSRSRRSKHKSWRYDDSSDSSSGSSSSSSGDEKTDRRSSIRKRHVDNKAQRNQDTEKQSSSLPRQDQIIPEQTTDTEVRRTVDKQSHEEGELSPENGAFVNNGHDTKAEFSEPAKQHANSEDSNDNRSARTGRSPTRDSGELNQGRALLLASSGQKASEPAAPKHGQGFSKSPSPNGTPRRIKKGRGFTERYAFARRYRTPSPERSPRAYRYGDRNIRRNFDRNTSYRSYSERSPPRRYRSPPGGRNRPRYQSRRSVSRSISRSPVRGRFRDRDRSRSPRRSVSPEDRRPPISDRLKSRLGPRSDERLADRRGRSKSNSRSSGSSRSRSPDATPPKRYDKRTSLSRSRSRSSSSSGQKGLVSYGDASPDSAVR 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02044 665 MobiDBLite consensus disorder prediction 181 214 - -
Viun1g02044 665 MobiDBLite consensus disorder prediction 427 443 - -
Viun1g02044 665 MobiDBLite consensus disorder prediction 180 665 - -
Viun1g02044 665 MobiDBLite consensus disorder prediction 322 345 - -
Viun1g02044 665 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 8 175 - -
Viun1g02044 665 Gene3D - 2 183 IPR029000 -
Viun1g02044 665 MobiDBLite consensus disorder prediction 624 638 - -
Viun1g02044 665 MobiDBLite consensus disorder prediction 557 609 - -
Viun1g02044 665 MobiDBLite consensus disorder prediction 400 426 - -
Viun1g02044 665 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Viun1g02044 665 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 20 173 IPR002130 GO:0000413|GO:0003755
Viun1g02044 665 MobiDBLite consensus disorder prediction 475 518 - -
Viun1g02044 665 MobiDBLite consensus disorder prediction 639 653 - -
Viun1g02044 665 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Viun1g02044 665 SUPERFAMILY Cyclophilin-like 7 175 IPR029000 -
Viun1g02044 665 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Viun1g02044 665 MobiDBLite consensus disorder prediction 267 300 - -
Viun1g02044 665 CDD cyclophilin_ABH_like 8 173 - -
Viun1g02044 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Viun1g02044 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Viun1g02044 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Viun1g02044 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Viun1g02044 665 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Viun1g02044 665 MobiDBLite consensus disorder prediction 346 367 - -
Viun1g02044 665 MobiDBLite consensus disorder prediction 368 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02044 Viun-Chr1 31811119 31817174 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02044 25 171 U-box Gene Family AT5G67530 48.322 1.74e-33 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02044 K09566 - gmx:100791082 796.964