Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02026 ATGGGTAACGCAGACTATGAATACCCGAACGTGGAGAGTGTGCAACGAGTGGCTATTCCACCCCCTCAACCATTCTTCAAGTCTCTCAAGTACTCCTTGAAAGAGACCTTTTTCCCAGATGACCCGTTTAGGAAGTTCAAGAACCAAACATCCTCAGTCAAGTTCGTCCTCGGACTTCAGTACTTCTTCCCCATCTTTGAATGGGCACCCAAATACACCCTCCAGTTCTTGAAATCAGACCTCATATCTGGCATCACCATTGCCAGTTTGGCCATTCCTCAAGGCATCAGCTACGCCAAGCTCGCCAACCTCCCTCCAATTCTCGGACTTTATTCGAGCTTCATACCCCCACTGATTTATGCTATGATGGGAAGCTCAAAGGATTTGGCGGTGGGAACTGTGGCGGTTGGATCACTTCTGATGGCTTCTATGTTGGGTCGAGTGGTGAACTACGTCGAGAATCCCAACCTTTTTCTCCATCTAGCTTTCACTGCTACATTCTTTGCTGGAGTTTTGCAGGCATCGCTGGGCTTCTTCAGGTTAGGGTTCATCGTGGATTTTCTGTCACATGCAACCATAGTAGGGTTCATGGGGGGAGCAGCCACAGTGGTTTGTCTGCAACAGCTAAAATCAATTCTTGGTCTTGAACATTTTACTCACGAGGCTGATATAGTGTCAGTGATGCGCTCTGTTTTCAGCCAAACTCACCAGTGGAGGTGGGAAAGCGCTGTGTTGGGTTGTTGCTTTATTTTCTTTCTCCTTGTCACAAGATACTTCAGCAAACGACAACCAAAGTTCTTCTGGGTGTCAGCAATGGCACCATTGACGTCGGTCATACTTGGAAGTCTACTGGTTTATCTCACACACGCTGAGAAACATGGAGTTCAAGTGATAGGAAAATTGAAGAAGGGGCTGAATCCACCTTCCGTGACGAATTTGGTGTTGGTGTCACCTTACATGGGAACTGCCATAAAAACTGGACTTGTCACTGGCATTATAGCACTTGCGGAAGGAATAGCAGTGGGTAGAAGCTTTGCAATGTTTAAAAATTATCATATTGATGGGAACAAAGAGATGATAGCTATTGGAACCATGAATATTTTTGGTTCCTTCACCTCCTGCTATCTCACCACAGGACCATTTTCACGTTCAGCTGTGAACTATAATGCGGGGTGCAAGACTGCAGCATCAAACATTGTGATGGCAATAGCAGTGATGTTAACATTGTTATTCTTAACACCCTTGTTCCATTTCACTCCCCTGGTGGTGTTATCAGCCATAATTGTGTCAGCAATGCTCGGTCTCATTGATTATGAAGCAGCCATTCATTTGTGGAAAATCGACAAATTTGATTTCTTTGTGTGCTTCAGTGCTTATGTTGGCGTAGTCTTTGGCAGTGTTGAAATTGGCCTAGTCATAGCAGTTGCAGTATCTCTACTTCGAGTACTTCTTTTTATTGCAAGGCCAAGAACATTTCTCTTAGGCAACATTCCAAATTCCACAGTATACAGAAACGTGGAACAATATCCAAATGCAAATCATGTTCCTGGAATCCTAATTCTAGAAATTGATGCTCCCATTTACTTTGCCAATGCAAGCTATTTACGAGAAAGAATCACAAGGTGGATAGATGAAGAGGAAGATAGGATAAAAGCTTCAGACCAAACCAGTTTACAGTATGTTATAATGAATATGACTGCTGTTGCAAACATTGATACAAGTGGAATAAGCATGCTTGAAGAGTGCAAGAAAACTGCTGACAGAAGAGGGTTACAACTTGTTTTGGTAAATCCTGGAAGCGAGGTGATGAAGAAGCTGAACAAATCGAAGTTCCTTGATGAACTAGGGCATAAATGGGTGTATCTGACAGTTGAAGAAGCTGTTGGTGCATGCAATTTCATGGTCAACTCATACAAACCGAACCCCATGAAGGATGATTCAGAACCTGATAAAAGCATTGTTTAG 1965 0.4346 MGNADYEYPNVESVQRVAIPPPQPFFKSLKYSLKETFFPDDPFRKFKNQTSSVKFVLGLQYFFPIFEWAPKYTLQFLKSDLISGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSKDLAVGTVAVGSLLMASMLGRVVNYVENPNLFLHLAFTATFFAGVLQASLGFFRLGFIVDFLSHATIVGFMGGAATVVCLQQLKSILGLEHFTHEADIVSVMRSVFSQTHQWRWESAVLGCCFIFFLLVTRYFSKRQPKFFWVSAMAPLTSVILGSLLVYLTHAEKHGVQVIGKLKKGLNPPSVTNLVLVSPYMGTAIKTGLVTGIIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGTMNIFGSFTSCYLTTGPFSRSAVNYNAGCKTAASNIVMAIAVMLTLLFLTPLFHFTPLVVLSAIIVSAMLGLIDYEAAIHLWKIDKFDFFVCFSAYVGVVFGSVEIGLVIAVAVSLLRVLLFIARPRTFLLGNIPNSTVYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRIKASDQTSLQYVIMNMTAVANIDTSGISMLEECKKTADRRGLQLVLVNPGSEVMKKLNKSKFLDELGHKWVYLTVEEAVGACNFMVNSYKPNPMKDDSEPDKSIV 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02026 654 Gene3D STAS domain 488 633 IPR036513 -
Viun1g02026 654 ProSiteProfiles STAS domain profile. 508 631 IPR002645 -
Viun1g02026 654 ProSitePatterns SLC26A transporters signature. 106 127 IPR018045 GO:0008271|GO:0008272
Viun1g02026 654 CDD STAS_SulP_like_sulfate_transporter 509 624 - -
Viun1g02026 654 PANTHER SULFATE TRANSPORTER 26 639 IPR001902 GO:0016020|GO:0055085
Viun1g02026 654 Pfam STAS domain 509 627 IPR002645 -
Viun1g02026 654 Pfam Sulfate permease family 77 457 IPR011547 GO:0016020
Viun1g02026 654 FunFam Sulfate transporter 31 488 634 - -
Viun1g02026 654 NCBIfam sulfate permease 64 627 IPR001902 GO:0016020|GO:0055085
Viun1g02026 654 SUPERFAMILY SpoIIaa-like 510 631 IPR036513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02026 Viun-Chr1 31650378 31656917 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02026 15 641 Inorganic Solute Cotransporters AT4G02700 67.994 0.0 902
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02026 K17471 - gmx:100791091 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02026 1 31650378 31656917 Viun1g02026 1 31650378 31656917 ECH