Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02007 ATGATGCCAAACATGCCGCGAACCGGAGAAAGAAGAAGAAAAAGAAACAACCTTAGCCGCTTGAACTTCAACCTATGTTTCTCAATCCCCATGCAACCGTTCACACCACAATCTTCCCCTACCGCCACCTCTTCAACCGTTCTTCAGAATCAAAACAAAAAACCACTATCACAACCCGCCACGTCAACGTCCCCGATCAGGAACTACGACCCTACTAACCCATTCCCGAGCCTCGGACCTGAACCCCAACCTGCTGACCTGGCCACCGCCTTCGTCTCCCAACGCTTCTTCTTCACCTACCCCGGCCGATCCAACTCCATCGTCGAATCCACCGTCACCGACACCGATTGCGCCACCTCCTCATCCTCGCCAAGAAATCCAGTCGCAACCGTCGAAGAAAAGGCGAAAACAGCGCTCGAAGGCAGCGTTGCGGTAGAGATGTATTCGCTGGACCCTTACGCGGATTTCCGGCACTCCATGGAGGAGATGGTGGCGGCGAGTCCCGAGTTGATCGATGTGGCAGCTAATTGGAAAGAGCTTCTTTTCTGCTACCTCGCGCTCAACCCGAAGAGCACGCACAAGTTCATCCTCTCCGCTTTTTCTGATCTTCTTCTCAGCCTCCTCTCGCAATCTTCTCCTCCGCCGCAGGATGCAGATGCCGGCGACGTTCCCGTCGGTGGCGATGGATGTTCGAATTAG 699 0.5451 MMPNMPRTGERRRKRNNLSRLNFNLCFSIPMQPFTPQSSPTATSSTVLQNQNKKPLSQPATSTSPIRNYDPTNPFPSLGPEPQPADLATAFVSQRFFFTYPGRSNSIVESTVTDTDCATSSSSPRNPVATVEEKAKTALEGSVAVEMYSLDPYADFRHSMEEMVAASPELIDVAANWKELLFCYLALNPKSTHKFILSAFSDLLLSLLSQSSPPPQDADAGDVPVGGDGCSN 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02007 232 MobiDBLite consensus disorder prediction 34 83 - -
Viun1g02007 232 MobiDBLite consensus disorder prediction 34 71 - -
Viun1g02007 232 MobiDBLite consensus disorder prediction 211 232 - -
Viun1g02007 232 ProSiteProfiles OVATE domain profile. 145 206 IPR006458 -
Viun1g02007 232 NCBIfam uncharacterized plant-specific domain TIGR01568 143 209 IPR006458 -
Viun1g02007 232 Pfam Transcriptional repressor, ovate 149 207 IPR006458 -
Viun1g02007 232 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 50 208 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02007 Viun-Chr1 31527918 31528988 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Viun1g02007 Ovate 1.2e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02007 - - pvu:PHAVU_001G153000g 311.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02007 1 31527918 31528988 Viun1g02007 1 31527918 31528988 ECH
Viun1g02007 1 31527918 31528988 Viun7g01564 7 20193357 20195553 PCT