Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02006 ATGAGTTGCTGCTGCAAATATTGTGGGCTGCAGTGTGAAAAGACTGTGATCGCCTTTGAAGGCCTTGCCCCGTTTCAGATGTCGACCGAATGCCTTGTATGCGAGAAAAGATTTCACCTATCCTGTCTTAAGTCCCATGGAGGCAATTCCGCTCGTAACAAAAGGCTACCCTTATGTGGAAACGGATGTAGGGAGATATATGAGAGACTTCAAGGGCTTCTTCGTGTTAAACATAACATAGAGGATGGATTTTCTTGGTCTTTTATTTACCGGGCAGATACTGACCCTAATTTAACAAGGTTAGACGCCGAAAATGTTGAATGCAATGCCAAACTGGGAGTTGCATTATCGGTATTGAGTGAGAGCTTCATGCCATACATTGAAGAGGGAAGCGGGACAAATATAATACAAAGTATTGTATATAGTTGTGGGTCAAACTTTCCTCGCCTGGACTGTAAGGGGTTTATTACTGCGATTCTAGAGAAAGATTATGAGATTATCAGCGTTGCATCAATCAGGATTCATGGGAACCAACTAGCAGAGTTGCCATTTGTTGCAACTGTTTTTGCTTATAGGAAGAAAGGAATGTTCGCTCGGCTTCTAAGGATAATTGAATCGACACTCAGTCACCTCAACGTTGAGTTATTGGTGGTACCAACCGTGAAACAAACCAGAGAAACTTGGATTCGTTCTTTCGGGTTTGAGCCAGTCGATTCGACAACAGAGAAAATAATAAAGGGCGTGAATATGTTGGTTTGTCGTGGCACAGAAAAGTTACAGAAGAGGTTACCAAAGCTTACATAA 804 0.4229 MSCCCKYCGLQCEKTVIAFEGLAPFQMSTECLVCEKRFHLSCLKSHGGNSARNKRLPLCGNGCREIYERLQGLLRVKHNIEDGFSWSFIYRADTDPNLTRLDAENVECNAKLGVALSVLSESFMPYIEEGSGTNIIQSIVYSCGSNFPRLDCKGFITAILEKDYEIISVASIRIHGNQLAELPFVATVFAYRKKGMFARLLRIIESTLSHLNVELLVVPTVKQTRETWIRSFGFEPVDSTTEKIIKGVNMLVCRGTEKLQKRLPKLT 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02006 267 PANTHER PHD FINGER PROTEIN 12 2 264 IPR042163 GO:0003714|GO:0045892
Viun1g02006 267 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 158 245 IPR016181 -
Viun1g02006 267 Gene3D - 141 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02006 Viun-Chr1 31520297 31524997 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02006 2 263 PHD Transcription Factor Family AT1G05380 40.741 1.50e-62 210
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02006 - - vun:114187404 544.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02006 1 31520297 31524997 Viun1g02006 1 31520297 31524997 ECH
Viun1g02006 1 31520297 31524997 Viun7g01567 7 20207457 20215660 PCT