Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01996 ATGACGACGATACGCAGATTCTGCTGCAACGATCTTCTACGCTTTGCCTCCGTCAATCTTGACCATCTCACCGAAACCTTCAACATGTCCTTCTACATGACCTATCTTGCAAGATGGCCAGACTATTTTCATGTTGCTGAAGGTCCTGGAAATCAAATAATGGGTTACATTATGGGTAAAGTAGAGGGGCAAGGAGAGTCTTGGCATGGTCATGTAACTGCAGTAACAGTTGCTCCAGAGTATCGCAGGCAGCAGTTAGCCAAGAAACTTATGAATCTGCTGGAAGACATCAGTGACAACATTGACAAGGCTTACTTTGTTGATCTCTTTGTGAGAGCATCAAATGCGCCAGCCATCAAGATGTATGATAAGCTTGGCTATGTGATTTATCGACGGGTGCTACGGTACTATTCTGGGGAAGAAGATGGTTTAGATATGAGGAAGGCTTTGTCTCGTGATGTTGAAAAGAAGTCCGTTATCCCTCTTAAACGGCCAGTGACTCCTGATGAATTAGAAATCTCGTCATCACGTTCTTATCCCTTGGGTTATGGTCGACTAGTATATTGA 567 0.4392 MTTIRRFCCNDLLRFASVNLDHLTETFNMSFYMTYLARWPDYFHVAEGPGNQIMGYIMGKVEGQGESWHGHVTAVTVAPEYRRQQLAKKLMNLLEDISDNIDKAYFVDLFVRASNAPAIKMYDKLGYVIYRRVLRYYSGEEDGLDMRKALSRDVEKKSVIPLKRPVTPDELEISSSRSYPLGYGRLVY 188
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01996 188 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 2 151 IPR000182 GO:0016747
Viun1g01996 188 FunFam N-alpha-acetyltransferase 20 2 161 - -
Viun1g01996 188 Gene3D - 2 164 - -
Viun1g01996 188 PANTHER N-ALPHA-ACETYLTRANSFERASE 20 1 171 - -
Viun1g01996 188 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 1 150 IPR016181 -
Viun1g01996 188 Pfam Acetyltransferase (GNAT) family 39 127 IPR000182 GO:0016747
Viun1g01996 188 CDD NAT_SF 43 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01996 Viun-Chr1 31317077 31328883 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun1g01996 Acetyltransf_1 1.1e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01996 K17972 - gmx:100306394 348.206