Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01950 ATGAAAGATCAGAATACCCAGTGTATTAAAGTTGAAGACATGGAGGCTCCAGTTTTCAAGGCATTGCTTCATTTTATATACTGGGACTCACTGCCAGATATGCATGAGCTTACTGGGTTGAACTCAAAGTGGGCATCAACCTTGATGGCTCAGCATCTTCTAGCAGCAGCTGATCGATATGGTCTTGAGAGGCTTAGGCTGACGTGTGAAGCAAGTCTCTGTGAAGATGTAGCAATTAATACTGTGGCTACGACTCTAGCCTTGGCAGAGCAGCACCACTGTTTCCAGCTGAAAGCTGTTTGTCTCAAGTTTATTGCTACTTCTGAAAATCTTAGAGCTGTGATGCAAACTGACGGATTTGAGTACTTGAAGGAAAGTTGCCCATCTGTTCTGACTGAGCTATTGGAGTACGTGGCCAGATTTACTGAGCATTCGGACTTCATGTGCAAGCATAGGAATGAAGCACTGCTTGATGGCAGTGACATAAATGGGAGGCGGGTGAAGCAAAGGCTCTAG 516 0.4516 MKDQNTQCIKVEDMEAPVFKALLHFIYWDSLPDMHELTGLNSKWASTLMAQHLLAAADRYGLERLRLTCEASLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIATSENLRAVMQTDGFEYLKESCPSVLTELLEYVARFTEHSDFMCKHRNEALLDGSDINGRRVKQRL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01950 171 Gene3D Potassium Channel Kv1.1; Chain A 1 71 IPR011333 -
Viun1g01950 171 CDD BACK_AtBPM-like 74 137 IPR034090 -
Viun1g01950 171 Gene3D - 77 154 - -
Viun1g01950 171 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 8 135 IPR045005 GO:0016567
Viun1g01950 171 SUPERFAMILY POZ domain 1 75 IPR011333 -
Viun1g01950 171 FunFam BTB-POZ and math domain 1 77 154 - -
Viun1g01950 171 Pfam BTB/POZ domain 3 75 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01950 Viun-Chr1 30885226 30888182 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Viun1g01950 BTB 1.5e-09 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01950 K10523 - vun:114174422 348.977