Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01931 ATGACATTCTTCCTCTCTTTCTCAACCAAAAGCCGTTGCCTACACTTCAACGAAACCACTTCAATAATTGATTACCTGAATTCCGACTTGCAGTTCTCCAGAACCCAATCCCTTTATGTCTCCAAACGTGTTTCAGGGTGCAGATTCCCTCAAAACCCCTTATCAGTGCTCACTTTCTTCAAAATAATAGGCTTTTCCCAAAGCCAGATTCTCTCCCTGATTCGTCAAAGACCCCAGATATTGTTTACAAACGTTGAGAAAATCTTGAGACCCAAAATTCAGCTCTTTCAGATGTCTGGATTCCAGGGTTACGAGTTATGCAGCTTCATTTCAAAGAATCCCTCCATTTTGACTCATAGCTTGAAGAAAACATTGGTCCCCTCAGTTGAAGCTATTAGGAAAATTGTCTATGACCAGAAAGATTTTATTCTTGTTTTGCACAGATGTGGCTGGATACTCCCAAAGTACAAAAGAATTATGGAGAATGTCGTCTTCTTGGTGAGTTGTGGCATTCTTGGGACTCATCTTTCATTGCTACTCAAACTTCATCCAAGGCTTTTCGTTGCACAGCGGTCTACTATTGAAAACAATGTTTCTCGAGCTGTAGACTTGGGTTTCCTTGAAAATTCAAGAATGCTTGTCCATGCAATTCATACATTAAGTTGTTTGAGCGATAAAACATTTGAGAGAAAGTTGAAACTAATTAATTGTTTTGGTTTTTCGAAGGATGAGGGCCTACAAATGTTCAAGAGAACCCCGACTTTGTTTAGAACATCAGAGAAGAAGTTGAAAATTGGAATGAAATTCTTCTTGCATACAGTTAAGCTGCCCAAGTCAGTCCTTATTCACCAGCCTAAGATTTTAATGTACAGCATGGAGGATCGCGTGCTTCCTCGATATAAAGTCTTCCAACTGTTGAAATCAAAAAATCTCTGCAAGAAAGTCCCCAGTTATATTCATGTGTTCTGCTTGTCTGAGGAGATGTTCTTGGACAAGTATATATCACAGTTCAGAGAAAATGCAGAGGAGTTATTAGTAGCATACAAGGGTCATTTTCTGGAGGCATAA 1068 0.3933 MTFFLSFSTKSRCLHFNETTSIIDYLNSDLQFSRTQSLYVSKRVSGCRFPQNPLSVLTFFKIIGFSQSQILSLIRQRPQILFTNVEKILRPKIQLFQMSGFQGYELCSFISKNPSILTHSLKKTLVPSVEAIRKIVYDQKDFILVLHRCGWILPKYKRIMENVVFLVSCGILGTHLSLLLKLHPRLFVAQRSTIENNVSRAVDLGFLENSRMLVHAIHTLSCLSDKTFERKLKLINCFGFSKDEGLQMFKRTPTLFRTSEKKLKIGMKFFLHTVKLPKSVLIHQPKILMYSMEDRVLPRYKVFQLLKSKNLCKKVPSYIHVFCLSEEMFLDKYISQFRENAEELLVAYKGHFLEA 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01931 355 Gene3D Transcription termination factor 3, mitochondrial 138 340 IPR038538 -
Viun1g01931 355 PANTHER CGI-12 PROTEIN-RELATED 19 336 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 SMART mt_12 107 138 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 SMART mt_12 246 277 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 SMART mt_12 71 102 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 SMART mt_12 278 309 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 SMART mt_12 177 207 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 SMART mt_12 143 172 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 Pfam mTERF 57 145 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 Pfam mTERF 223 329 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 Pfam mTERF 129 232 IPR003690 GO:0003690|GO:0006355
Viun1g01931 355 FunFam Mitochondrial transcription termination factor-like 121 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01931 Viun-Chr1 30806009 30807076 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Viun1g01931 mTERF 3.3e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01931 K15032 - csin:114301363 328.946