Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01907 ATGGCTGGCAGTAACCAAGTCAATCTCAATGAATCTAGGAGTGTTGTTCCACTGAATACATGGGTGTTAATCTCGAATTTCAAGCTGTCTTACAAGCTTCTCAGACGTGACGACGGAACTTTCAATCGTGAGTTGGCGGAGTTTCTTGATAGGAAGGTCCCCGCCAATGCAATTCCCGTTCATGGGGTGTTTTCAATCGATCATGTCGATAGAAACGTTGGGTTGTTTTACCGGGTGTATTTGCCAGCCTCTGGGGACGAGGCTCAGTGGGGTATCAGAGACCTTGAGAGACCGTTGAGCACCACGGAAATTGTTCCTGTGATCATATTCTTTCACGGGGGAAGCTTCTCGCATTCCTCGGCAAACAGTGCTATCTACGATACCTTCTGCCGGCACCTTGTCAGCATTTGCAAGGCTGCTGTGGTGTCCGTGAACTACCGGAGATCGCCGGAGCACCGGTATCCGTGCGCCTACGATGATGGGTGGGCAGCATTGGAGTGGGTGAAGTCGAGAACGTGGCTGCAAAGTGGGAGGGAGTCGAAGGTTCATGTCTACTTGGCAGGGGACAGTTCTGGTGGGAACATTGTTCATCATGTGGCAGTAAAGGCTGCGGAGGAAGAAATTGAGGTCCTGGGGAATATTCTTCTTCACCCTTTGTTTGGGGGAGAGAAGAGGACGGAATCGGAGTTGAGGTTGGATGGGAAATACTTTGTTAGGTTGAAGGATCGTGATTGGTATTGGAGGGCTTTTCTGCCTGAAGGAGAGAATAGAGACCACCCTGCTTGCAACCCCTTTGGACCAAGGGGGAGAAGCCTTGCGGGACTCAGCTTCCCCAAAAGTCTTGTTTGCGTGGCTGGTTTGGATCTTCTGCAGGATTGGCAACTGGCATATACGAAAGGTCTCGAGGATTCTGGACAAGAGGTCAAACTTCTCTATCTCAAGGATGCCACCATTGGCTTCTACTTCTTGCCAAACAATGAACATTTCTACTGCCTCATGAGGGAAATCAACAACTTCGTGAATTCTGACTGTTAA 1035 0.4966 MAGSNQVNLNESRSVVPLNTWVLISNFKLSYKLLRRDDGTFNRELAEFLDRKVPANAIPVHGVFSIDHVDRNVGLFYRVYLPASGDEAQWGIRDLERPLSTTEIVPVIIFFHGGSFSHSSANSAIYDTFCRHLVSICKAAVVSVNYRRSPEHRYPCAYDDGWAALEWVKSRTWLQSGRESKVHVYLAGDSSGGNIVHHVAVKAAEEEIEVLGNILLHPLFGGEKRTESELRLDGKYFVRLKDRDWYWRAFLPEGENRDHPACNPFGPRGRSLAGLSFPKSLVCVAGLDLLQDWQLAYTKGLEDSGQEVKLLYLKDATIGFYFLPNNEHFYCLMREINNFVNSDC 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01907 344 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787
Viun1g01907 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787
Viun1g01907 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Viun1g01907 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
Viun1g01907 344 PANTHER ARYLACETAMIDE DEACETYLASE 38 315 - -
Viun1g01907 344 FunFam Gibberellin receptor GID1 1 342 - -
Viun1g01907 344 SUPERFAMILY alpha/beta-Hydrolases 58 341 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01907 Viun-Chr1 30613680 30616225 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01907 1 342 Carbohydrate Esterase AT3G63010 73.761 0.0 546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01907 K14493 - gmx:100788435 652.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01907 1 30613680 30616225 Viun1g01907 1 30613680 30616225 ECH
Viun1g01907 1 30613680 30616225 Viun7g01646 7 21248335 21251004 ECH
Viun1g01907 1 30613680 30616225 Viun7g01646 7 21248335 21251004 PCT