Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01895 ATGACAGTGTTGGGGTTCGGTCCCAGAGATCGGTTGTGCCGGTACTTTCAGAAGCCGAAGCCATTTTCAGATTTTGTGGCGCTGTCAGGCATCACTGCAAGATGCATCAGCCACCCCAGAATTGTCCATATATCAGACCCCACTCTCCTTCCACCCTTTCAATTCTCATTTTTCCTTCTCTTTACATCAATCTTTCTCTTTCTCCTTCTCTTTCTCAACATGAACAACACCTCCACCCACGACTTCATCCATGACTTCATGAACGTCGACTCCTTCTCTCAGCTCCCCTTTCTCCGCTCCTCTCCCTCCAAAGATAAAGACAAGCCCATTCGTCTCTTCGGCCAAGACTTTCCCAAAACCACCCACACACCCTCCCATCACACCACCATCACAAGAAACTCCGAACCCACCCGCAGATTCGAGTGCCATTACTGTTGCAGAAACTTTCCCACTTCTCAAGCCTTGGGTGGCCACCAAAACGCCCACAAACGAGAACGCCAACATGCCAAACGACACCTCCACCCCGGCATGCTTCACACCACCCTCTCCGATCCTACCACCTACACTTTCACCAACCCGGTCCCTTATTCATCTCTCACACCTTGGGATTCTCACGCCCCTCCCAGAAGCTTCTTCGGAAGCTCCTTCTCTCACCAGCTTCAACCCATCAATGGATGCCCCTTGGGCATGTGGCGAATCCCCAACACCGCTGTAGCCACTCACACCACCCACCAGGGTAACCCTATTTTGCACCGCGCGCCGCCTTTGCTTTCTGGTCAGGAAATGGTGCGGGCGAGGATGGCTCCCTCACCCTCTGGCTCGCAGAACGGTTTAGGTTATGACCTCAAACCCAACCCCGGCGTGAGCGACCATGTGAGTTTGGATCTTCATCTGTGA 897 0.5307 MTVLGFGPRDRLCRYFQKPKPFSDFVALSGITARCISHPRIVHISDPTLLPPFQFSFFLLFTSIFLFLLLFLNMNNTSTHDFIHDFMNVDSFSQLPFLRSSPSKDKDKPIRLFGQDFPKTTHTPSHHTTITRNSEPTRRFECHYCCRNFPTSQALGGHQNAHKRERQHAKRHLHPGMLHTTLSDPTTYTFTNPVPYSSLTPWDSHAPPRSFFGSSFSHQLQPINGCPLGMWRIPNTAVATHTTHQGNPILHRAPPLLSGQEMVRARMAPSPSGSQNGLGYDLKPNPGVSDHVSLDLHL 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01895 298 SUPERFAMILY beta-beta-alpha zinc fingers 137 168 IPR036236 -
Viun1g01895 298 ProSiteProfiles Zinc finger C2H2 type domain profile. 140 167 IPR013087 -
Viun1g01895 298 MobiDBLite consensus disorder prediction 266 286 - -
Viun1g01895 298 ProSitePatterns Zinc finger C2H2 type domain signature. 142 162 IPR013087 -
Viun1g01895 298 PANTHER ZINC FINGER PROTEIN GIS 83 298 IPR044291 GO:0003700|GO:0009739|GO:0010026|GO:0010090
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01895 Viun-Chr1 30485233 30486129 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01895 74 298 C2H2 Transcription Factor Family AT2G41940 39.852 7.21e-39 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01895 - - vun:114190689 583.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01895 1 30485233 30486129 Viun1g01895 1 30485233 30486129 ECH