Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01832 ATGATCAACGTGAAACGCGAACTGGACGCTGATGATGATTGCAGTAGCGATGATAAGCGTGACTCTGAACTCCACGCCGTATGCGACGACGCTGATTACCAAACACCGAAACGCCGTCGAGGTATTCGTTCTCGGTATCTGGCCTTCAAGAACATGATTCATGATGAAAGGGAAGAAATTGCTAGGCCTGACTCTGACAAGTTCGATTTGATCTTTAGTGAAATGGAGAGCTTACATCAGCAAGTTACAAAACCAAGAGAACAAGTAGCTGATGCAAAGGCTCTTTTGGAAATCACTCAATCCCTGGTAATGTCTGTGAGGACTACTGCGAATGGTGGAATAACTCCTTCAGACTTTGTTACGCACATTCTTAAAAAGTTCGGAGGACATGTTGGACCAAGTAATAGCGCAGAAGATTGCAGTAGAAATTCAGTAGCTTGGAATGATATTGGAGTTGCGGTGTCACATGTTTTTAGAGCAGGTTATGGGTGCTGTACAATGATGGCCCCAATGGATGCTAAAATAAAGCAGAGGAAGGTCATTAATCGTCGAAAGCCTGTGAGACCCACTGAATTGGCTCGGCCTGAAGAGCTGTGTGGAGGTTCAGGGGAAGAGATAGCGGAAACCGATAAGCTTATGTTAACTATGTTTAACATCTTAAGGATCAACAAAGTTGTGAAGCTTGAAAATCTGGTTTTGAATCGGAACTCCTTTGGACAAACCGTGGAGAATTTATTTGCTTTATCCTTTTTAGTCCGAGATGGTCGGGCTGAAATAAAAGTTAACGAGGCCGGATGGCAACTAGTTTCGCCAAGGAACGCTCCTGCTGCAAATTCAGTTGTTTCCGGGGATGTTGCTTTCAGCCATTTTGTATTCCGATTTGACTTCAATGATTGGAAGTTGATGGTTCGCACTGTTGGGGTTGGAGAGGAGCTGATGCCTCATAGGAACAGTGAATCACAGAGATAG 969 0.4427 MINVKRELDADDDCSSDDKRDSELHAVCDDADYQTPKRRRGIRSRYLAFKNMIHDEREEIARPDSDKFDLIFSEMESLHQQVTKPREQVADAKALLEITQSLVMSVRTTANGGITPSDFVTHILKKFGGHVGPSNSAEDCSRNSVAWNDIGVAVSHVFRAGYGCCTMMAPMDAKIKQRKVINRRKPVRPTELARPEELCGGSGEEIAETDKLMLTMFNILRINKVVKLENLVLNRNSFGQTVENLFALSFLVRDGRAEIKVNEAGWQLVSPRNAPAANSVVSGDVAFSHFVFRFDFNDWKLMVRTVGVGEELMPHRNSESQR 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01832 322 PANTHER UNCHARACTERIZED 31 321 IPR027786 GO:0005634|GO:0006281|GO:0030915
Viun1g01832 322 MobiDBLite consensus disorder prediction 1 21 - -
Viun1g01832 322 Pfam Nse4 C-terminal 226 313 IPR014854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01832 Viun-Chr1 30057077 30061489 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01832 39 318 Non-SMC Element family AT1G51130 50.534 5.48e-96 288
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01832 K22825 - gmx:100781485 487.263
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01832 1 30057077 30061489 Viun1g01832 1 30057077 30061489 ECH