Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01829 ATGTATCAGTGTAGTTCCCAAATGTATGGAACTGATTGGGAATCCTACATGGGGATTACCAACCTAACCAAGGTTGTTGGATCAGAACAAGTGAGTGTTCTTGAACCAAAAAACTCACCTTTCAACATTGTCACCACTCCTCTTCAAATTCAAACCCCACAAGGCTTTTGTGCAACTGCAACAAAAGGGCTGGTGAGTTTTCAAGCACAACAACATGTTCATCAGCAGCAGCAGCAGCATCAGATTGAAGTTCCTGCTTGGTGCTTTGAGTTTCCAAAGACAACAACAACAATTGACTCTCACATGCTGAATATTCGCCAAGCCTCTGGGGATAACTTCACCACCAAACAAGATCCACCCTCATCTCAGTTCACAAGCCCCTTGTGCCCGGTTGCTGAATCTTTCTTGTCGTCCAGCACTGGTGCAGATTGTCCTTCTTCTTCTGAAAAATATTGTAAAATTACTTCCTATTCTGAAAAATATAGTAGTATGCAGCCTGATGGTATGCCATATTACGATCACTTTTCCCAAGAAGAAGATAAACTACTGAGAGATGATGCTGCCACGGATGAAAGGCCCCTTGAAATTTCCTTTCAGAGAAACCAGTTGGAATCATGTACAAAGCCAAAAAAGCAAGCTCCTCATAGACTTTGTGGGGTTGCCTGTGTAACTTCTAGCAACTCTGCTTCTAGAAGAGGCAAAAGAAGAATAAAATGGACCAACGATCTACACGAGCCATTTATGATGATTGTTAACAGTCTTGGTGGTCCAGAAAAGGCAAAACCTAAGGCTATACTAGATATGATGAAATCAGATTTGCTGTCTATTTCTCATGTTAAAAGTCATTTACAGAAATGTAGGTCTACAATAAACATGCACAAAGCTTTGCAGGAAAAATCCGAGGAAGGACAGAGAATGGATGGGGTGTCTGAGCTTCAAGTGAAAATCCACATGCAAATTGAGGAATCAAGGCAACTGCAACTAGAGGTTCGGAGGAATATCTGCCAACAACTAGAGATGCAACGAAATCTGCAAATGCTAATTCAACAGCAAAGCCAGCAATTGAAAGTAATGTTAGATTACCAAAAGAAAAAAACGAAACTGGACACAGAACTGGAAGCAACTGTCCCCTAA 1134 0.4127 MYQCSSQMYGTDWESYMGITNLTKVVGSEQVSVLEPKNSPFNIVTTPLQIQTPQGFCATATKGLVSFQAQQHVHQQQQQHQIEVPAWCFEFPKTTTTIDSHMLNIRQASGDNFTTKQDPPSSQFTSPLCPVAESFLSSSTGADCPSSSEKYCKITSYSEKYSSMQPDGMPYYDHFSQEEDKLLRDDAATDERPLEISFQRNQLESCTKPKKQAPHRLCGVACVTSSNSASRRGKRRIKWTNDLHEPFMMIVNSLGGPEKAKPKAILDMMKSDLLSISHVKSHLQKCRSTINMHKALQEKSEEGQRMDGVSELQVKIHMQIEESRQLQLEVRRNICQQLEMQRNLQMLIQQQSQQLKVMLDYQKKKTKLDTELEATVP 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01829 377 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 225 366 IPR044848 GO:0003700
Viun1g01829 377 NCBIfam myb-like DNA-binding domain, SHAQKYF class 234 288 IPR006447 GO:0003677
Viun1g01829 377 Gene3D - 233 290 - -
Viun1g01829 377 SUPERFAMILY Homeodomain-like 233 290 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01829 Viun-Chr1 30008856 30011760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01829 222 362 G2-like Transcription Factor Family AT4G28610 42.857 2.38e-29 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun1g01829 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01829 - - gmx:102662952 571.622