Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01820 ATGGCAGGAACTGGTTTCTACACCTCCTGTCTTTCCTCTACCAGCAACTTGGGGACATGTTGGTTGGTATTAAAAACTCACAATGCAAGGGCACTGCCAGGGAAACTACCTGGAACTGGTATGAGAAGATTGGCGATAAGAGCAGAAGTGGAGTTTGTGACCGCTGACAAGGCGAGGGAACTTGTAGAAGTGAATGGGTATTCTGTTCTTGATGTGAGGGACAAGAATCAATTTGAACGAGCTCACATAAAATCTTGTAGTCATGTGCCTCTTTTTATTGAAAACAAAGACAATGATCCTGGTACTATTATCAAAAGACAACTGCACAATAATTTTTCTGGGTTGTTCTATGGGTTGCCATTCACTAAGCCAAATCCTGATTTTGTACAATCTGTTAAGACCCAGTTTCCACCTGAAAGTAAACTCTTGGTTGTGTGCCAGGAAGGACTGAGGTCTACTGCAGCAGCAGAAAAGTTAGAGAAAGCTGGTTATGAAAATATAGCATGCATAATATCTGGCCTTCAAACCGTAAAACCAGGGACATTTGAGTCTGTCGGGTCCACAGAGTTGGAGAATGCAGGCAAAGCTGGTTTGGTGACAATCCAAGGAAAAATCTCAACTGTGTTGGGAACTATTCTTGTTTGTGCATATTTATTCGTTACATTCTTCCCTGATCAAGCAGAGAAGCTATTCCAATTGGCCCCTACAGGATAA 714 0.423 MAGTGFYTSCLSSTSNLGTCWLVLKTHNARALPGKLPGTGMRRLAIRAEVEFVTADKARELVEVNGYSVLDVRDKNQFERAHIKSCSHVPLFIENKDNDPGTIIKRQLHNNFSGLFYGLPFTKPNPDFVQSVKTQFPPESKLLVVCQEGLRSTAAAEKLEKAGYENIACIISGLQTVKPGTFESVGSTELENAGKAGLVTIQGKISTVLGTILVCAYLFVTFFPDQAEKLFQLAPTG 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01820 237 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 9, CHLOROPLASTIC 1 236 IPR044615 -
Viun1g01820 237 Gene3D - 42 182 IPR036873 -
Viun1g01820 237 CDD RHOD 58 178 - -
Viun1g01820 237 SMART rhod_4 53 183 IPR001763 -
Viun1g01820 237 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 41 175 IPR036873 -
Viun1g01820 237 Pfam Rhodanese-like domain 54 175 IPR001763 -
Viun1g01820 237 ProSiteProfiles Rhodanese domain profile. 63 186 IPR001763 -
Viun1g01820 237 FunFam Rhodanese-like domain-containing protein 9, chloroplastic 40 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01820 Viun-Chr1 29947825 29950109 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01820 9 231 Sulfurtransferasese or Rhodanese AT2G42220 67.265 5.46e-109 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01820 - - vum:124827221 453.366