Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01812 ATGGCTTCCAAGACCACCAACCCAACAACAAATAATCAATTGGAACCACTCCCACCACCTCAGCACCGTCACCCTCATCCTCATCATTATCAGTTACAACAACACCAACACCATCAAGTTCATGACCATCAAATTTCTTTTGGAATGATGCAATCTTCTTCTTCGTCTTCCTCTATCCCCGGAAATTACCTAGGCAAGGATTCCGGCGCTTATGACTTGGGTGAATTGGATCAAGCGTTTTTCCTCTACCTTGATGGACAAGCAGACCCATCCACTGTTCAAGACCAAAGACAGAACTCATCATCCGGAATGAGGCCTCCGACTCTCAACATTTTCCCATCCAAGCCTATGCACGTTGAGCCATCATCATCCAAGTCCAAGGCTAACTTAGAGTTAGTTTCTCCGCAAACAAGTGGTTCAAAGAGACCATCAGAGCCGTCGATGGAGTTGGCCAACCCTCGAAACGAAGCTGCTTCGGCCCCTCAACCACCCAAAGCTGTCAAGCGAGAGAGCAATCGCAAAGGTCCAACGTCGAGTTCTGAACAAGAAGGACCAAAAACACCAGATCCTAAGACACTGAGAAGACTTGCTCAGAATAGAGAGGCAGCTAGGAAAAGCAGGCTTAGGAAAAAGGCATATGTTCAACAGCTAGAGTCAAGTAGGGTTAGGCTTAATCAGCTGGAACAAGAGCTACAACGTGCTAGAACTCAGGGCATGTTCTTGGGTGGTGGAGGTGCACTTTTGGGAGGAGAGCAAAGCCTCCCTGTCGCTATGAATACCATTACCTCGGAGGCTGCAATGTTTGACGTGGAATATGCAAGATGGGTTGAGGAGCACCACCGCATAGTGTGTGAGCTAAGAGCTGCAGTGCAAGAGCACCTTCCTGAGAACGAGCTTAGACTCTTTGTGGACAATTGCGTGGCGCATTATGACCAAGTAATCAACCTCAAGAGCCTCGTGGCCAAAACAGACGTGTTCCATCTGGTTTCTGGCATGTGGAAAACCCCGGCTGAACGTTGCTTCATGTGGATCGGAGGATTCAGGCCTTCTGAACTCATTAAGATTATTCTGAGTCAAATTGAGCCTCTGACGGAGCAACAAATATTGGGTATATGTGGATTACAACAATCGACTCAAGAGGCAGAAGAGGCTCTCTCTCAAGGGCTAGAGGCTCTGAACCAATCTCTTTCGGACACCATAACTTCAGACTCTCTAAGCTATCCTCTCAATATGGCTAACTATATGGGACAAATGGCTGTGGCCATGAACAAGCTCTCAACTCTCGAAGGTTTCGTTAGACAGGCAGATAATCTTCGGCACCAAACCATTCACCGTCTGCATCAGCTCCTAACAACGCGTCAAGCAGCAAGGTGTTTTCTGGCCATAGCCGAGTACTTCCATCGTCTTCGAGCTCTGAGTTCATTGTGGTTGGCACGCCCTCGCGTAGAATAG 1452 0.4807 MASKTTNPTTNNQLEPLPPPQHRHPHPHHYQLQQHQHHQVHDHQISFGMMQSSSSSSSIPGNYLGKDSGAYDLGELDQAFFLYLDGQADPSTVQDQRQNSSSGMRPPTLNIFPSKPMHVEPSSSKSKANLELVSPQTSGSKRPSEPSMELANPRNEAASAPQPPKAVKRESNRKGPTSSSEQEGPKTPDPKTLRRLAQNREAARKSRLRKKAYVQQLESSRVRLNQLEQELQRARTQGMFLGGGGALLGGEQSLPVAMNTITSEAAMFDVEYARWVEEHHRIVCELRAAVQEHLPENELRLFVDNCVAHYDQVINLKSLVAKTDVFHLVSGMWKTPAERCFMWIGGFRPSELIKIILSQIEPLTEQQILGICGLQQSTQEAEEALSQGLEALNQSLSDTITSDSLSYPLNMANYMGQMAVAMNKLSTLEGFVRQADNLRHQTIHRLHQLLTTRQAARCFLAIAEYFHRLRALSSLWLARPRVE 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01812 483 MobiDBLite consensus disorder prediction 1 42 - -
Viun1g01812 483 CDD bZIP_HBP1b-like 191 240 - -
Viun1g01812 483 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 194 209 IPR004827 GO:0003700|GO:0006355
Viun1g01812 483 MobiDBLite consensus disorder prediction 117 145 - -
Viun1g01812 483 Pfam bZIP transcription factor 191 226 IPR004827 GO:0003700|GO:0006355
Viun1g01812 483 SUPERFAMILY Leucine zipper domain 191 233 IPR046347 GO:0003700|GO:0006355
Viun1g01812 483 FunFam BZIP family transcription factor 190 239 - -
Viun1g01812 483 Coils Coil 210 237 - -
Viun1g01812 483 SMART brlzneu 187 261 IPR004827 GO:0003700|GO:0006355
Viun1g01812 483 Gene3D - 190 240 - -
Viun1g01812 483 MobiDBLite consensus disorder prediction 90 194 - -
Viun1g01812 483 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 189 233 IPR004827 GO:0003700|GO:0006355
Viun1g01812 483 MobiDBLite consensus disorder prediction 90 108 - -
Viun1g01812 483 ProSiteProfiles DOG1 domain profile. 265 479 IPR025422 GO:0006351|GO:0043565
Viun1g01812 483 PANTHER TRANSCRIPTION FACTOR TGA9 100 481 - -
Viun1g01812 483 Pfam Seed dormancy control 283 357 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01812 Viun-Chr1 29869520 29876128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01812 61 481 Basic region leucine zipper (bZIP) Transcription Factor Gene Family AT5G06839 65.158 0.0 563
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun1g01812 DOG1 1.3e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01812 K14431 - gmx:100815176 811.601