Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01807 ATGCTACCTCACAATCAACAAAAAAGAAGACTCGATAATACTCAAGGTATGGCATTTCAACTGTCACTCATTTGTTTGATCTCCACCATCGTGATTGCATTCATACTATGGAGAAAACAAAAGAAGACCCTTCTTCCACCAACTCCAATGGCCCTCCCCATCATTGGTCACCTCCACCTTCTCTCCACAATACCTCACCGAGATTTTCACAACCTCTCTATCCGTTATGGACCCATCATGCACCTTTTCCTCGGTTCAGTCCCTTGTGTGGTGGCTTCAACCGCAGAAGCCGCCAAAGAGTTCCTCAAAACTCACGAATCCTCCTTCTCCAACCGCCTTGCTCAAACCGTCGCCATTGAGGCCTTAACCTACGGCTTCCAAGACTTTTTCTTCGCACCTGACGGACCCTATTGGAAGTTCATGAAGAAATTGTGCATGTCTGAACTTCTCGGTGGCCACATGTTAGAGCAGCTCCTTCCGGTGAGGCAGCAAGAGAGCAAGAGGTTCATCCAATGCCTGCTCCAAAAAGGGGTGGCTGGTGAGGCCGTGGATTTTGGAGGAGAGTTGATGACACTCTCCAATAACATCGTCTCCAGAATGACTGTGGGTCACACCAGTACTGAAAACGAGAAGGACGGTGAAGAGATGAGAAAGCTGGTTGCGGATTCCGCAGAGCTCGTGGGGAAGTTCAACATATCGGACTTCATTTGGTTCTTGAAGCGTTTCGATTTGCAGGGATTCAACGTGAGGCTCAAGAAAACTCGGGACAGGTTTGATGCTGTGTTGGACAGAATCATAAGGCAGCGTGAAGAGGAAAGAAGGAACAAGAAAGAAACCGGTGGAACACGTCCGTTTAAGGATATGCTTGATGTTTTGTTGGACATCTTCGAAGATGAGAGTTCTGAAATGAAACTAAACAAAGACAACATTAAGGCCTTCATCCTGGACATATTTGTTGCTGGGACTGACACGACATCAATAACCATAGAATGGGCTCTGTCAGAGTTAATAAACCATCCACATGTGTTGGAGAAGGCAAGGCTAGAAATAGATGCAGTTGTTGGAAAGAGTAGAATCGTAGAAGAATCAGACATTAAGAACCTTCCTTACCTGCAAGCCATTGTTAAAGAAACACTTAGGCTTCACCCACCTGGTCCATTACTTACTAGAGAGTCATCAACAAGTGAAGTGGTGTGTGGGTATAATATTCCACCCAAAACTCGATTATTTATCAACATTTGGGCTATTGGCAGAGACCCCAATCAGTGGAAAAACCCTCTTGAGTTCATGCCAGAGAGGTTTATTGATGAAAATGGGCATAGTGAATTTGATGTTAGGGGACAAAGTTATAATCTTCTTCCTTTTGGAAGTGGAAGAAGAAGGTGCCCCGCTATTTCTCTAGCATTACATGTTGTGCATGTGAATGTGGCTGCACTGATTCAGTGTTTCCAGTTAAAGGTTAATGGTGGAGAAGGCAAGGTGGACATGGAAGAAAAGCCTGGCCTCACTCTTCCAAGGGCTCACCCCTTAATCTGTGTCCCTGTTCCAAGGCTTAACCCATTCCCATCTATGTGA 1575 0.4546 MLPHNQQKRRLDNTQGMAFQLSLICLISTIVIAFILWRKQKKTLLPPTPMALPIIGHLHLLSTIPHRDFHNLSIRYGPIMHLFLGSVPCVVASTAEAAKEFLKTHESSFSNRLAQTVAIEALTYGFQDFFFAPDGPYWKFMKKLCMSELLGGHMLEQLLPVRQQESKRFIQCLLQKGVAGEAVDFGGELMTLSNNIVSRMTVGHTSTENEKDGEEMRKLVADSAELVGKFNISDFIWFLKRFDLQGFNVRLKKTRDRFDAVLDRIIRQREEERRNKKETGGTRPFKDMLDVLLDIFEDESSEMKLNKDNIKAFILDIFVAGTDTTSITIEWALSELINHPHVLEKARLEIDAVVGKSRIVEESDIKNLPYLQAIVKETLRLHPPGPLLTRESSTSEVVCGYNIPPKTRLFINIWAIGRDPNQWKNPLEFMPERFIDENGHSEFDVRGQSYNLLPFGSGRRRCPAISLALHVVHVNVAALIQCFQLKVNGGEGKVDMEEKPGLTLPRAHPLICVPVPRLNPFPSM 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01807 524 Pfam Cytochrome P450 46 512 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 CDD CYP93 77 514 - -
Viun1g01807 524 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS E-class P450 group I signature 97 118 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS E-class P450 group I signature 73 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS E-class P450 group I signature 412 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 PANTHER CYTOCHROME P450 98A9 24 519 - -
Viun1g01807 524 SUPERFAMILY Cytochrome P450 46 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 Gene3D Cytochrome P450 32 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01807 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Viun1g01807 524 FunFam Cytochrome P450 family protein 37 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01807 Viun-Chr1 29833749 29836069 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01807 23 517 Cytochrome P450 AT5G06900 49.698 3.77e-174 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01807 K24188 - gmx:100815706 776.933