Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01806 ATGTCCGTTTCCAAAACAGATAAGAGCAGAAAACAGAAACTACAAATTAAGAACCTTATTTTCCTTATATACGTTGCTAACCAGCATTTTTCATTTACTTGCGAAACATTCAAATCAAACATGGCTCATTACCAAGACTACATCCTTCTTGTCACCACATTTTTAGTCTCCACAATCGTGGTTCGAGCCATACTCAGCAGAAAACGAAACAAGACTAATCGACCACCAAGTCCACAAGCCTTACCCATCATTGGACATCTCCACCTTCTGGCTCCAATACCTCACCAGGCTCTTCACAAGCTATCTACTCGCTATGGACCCATAATGCACCTTTTCCTTGGCTCCGTGCCCTGTGTAGTGGCTTCCACACCAGAAGCTGCTAGAGAATTCCTAAAAACTCACGAAAACCATTTCTCCAACCGCCCGCAGAGTTCTGCAGTTGATTTTCTAACCTATGGCTCCCAGGACTTCTCTTTTGCGCCATATGGACCTTACTGGAAGTTCATGAAGAAAATATGCATGTCTGAACTTCTGGGGGGTTCCACTTTAACTCAGCTGCTTCCTGTGAGGAGACAAGAGACGTCAAGGTTTCTGAGGCTTATGCTCAAAAAAGGGAAGGCGGGTGAGGCTGTTGATGTCGGGGGAGAACTTTTGAGACTCTCGAATAACGTTGTGTCGAGGATGATTATGAGCCAAACATGTTCTGAAGATGACAGTGAAGCTGAAGAGGTGAGGAAGTTGGTGCAAGACACTGTTCTTCTCACGGGGAAGTTTAATGTGTCGGATTTCGTTTGGTTCTTTAAGAACTGGGATGTGCAGGGGTTCGGGAAAAGACTGAAGGAAATTCGGGACAGGTTTGACACCATGATGGAGAGAGCGATCAAGGAGCATCAAGAGGAAAGAAAGAGGAGAAAGGAAGTGGGAAGTGGAAGAGATGATGATGATGATCAAATCAAGGATCTACTTGATGTGTTATTGGACATACATGAAGATGAAAACTCTGACATTAAATTGACCAAAGAGAACATAAAGGCCTTCATCTTGGACGTATTCATGGCAGGAACAGACACTGCGGCCTTAACAATCGTATGGGCTCTGGCTGAGTTGATTAACCACCCAGATGTGATGGAGAGAGCAAGACAAGAGATTGATGATGTGATTGGAAGTGGTAGATTAGTGGAAGAATCAGACATTGTCAACCTTTCTTACCTACAAGCTATAGTGAAAGAAACGCTGAGGATTCACCCCACAGGTCCATTAATTGTTAGAGAATCATCTGAAAGTTGCACTATCTGGGGCTATGAGATTCCACCGAAGACTCAGTTGTTTGTTAATGTGTGGGCTATTGGTAGGGATCCCAACCACTGGGAGAACCCACTTGAGTTTAGACCAGAGAGGTTTCTTGGTGAAGAGGGAAGTGGTAAGAGCCAGTTAGATGTGAGGGGACAATATTTTCATCTGATTCCGTTTGGGAGTGGAAGAAGAGGGTGTCCTGGAACCTCACTGGCTTTGCAGGTTGTACAGACCAACCTTGCTGCTATGATTCAGTGCTTTGAATGGAAGGTTAAAGGAGTAAATGAGACTGTTGACATGGAAGAGAAACCTGGGTTAACTCTTTCAAGGCTTCATCCATTGCTTTGTGTTCCTGTGCCTAGGCTTAATCCTTTTCCTCCTCTGTGA 1680 0.444 MSVSKTDKSRKQKLQIKNLIFLIYVANQHFSFTCETFKSNMAHYQDYILLVTTFLVSTIVVRAILSRKRNKTNRPPSPQALPIIGHLHLLAPIPHQALHKLSTRYGPIMHLFLGSVPCVVASTPEAAREFLKTHENHFSNRPQSSAVDFLTYGSQDFSFAPYGPYWKFMKKICMSELLGGSTLTQLLPVRRQETSRFLRLMLKKGKAGEAVDVGGELLRLSNNVVSRMIMSQTCSEDDSEAEEVRKLVQDTVLLTGKFNVSDFVWFFKNWDVQGFGKRLKEIRDRFDTMMERAIKEHQEERKRRKEVGSGRDDDDDQIKDLLDVLLDIHEDENSDIKLTKENIKAFILDVFMAGTDTAALTIVWALAELINHPDVMERARQEIDDVIGSGRLVEESDIVNLSYLQAIVKETLRIHPTGPLIVRESSESCTIWGYEIPPKTQLFVNVWAIGRDPNHWENPLEFRPERFLGEEGSGKSQLDVRGQYFHLIPFGSGRRGCPGTSLALQVVQTNLAAMIQCFEWKVKGVNETVDMEEKPGLTLSRLHPLLCVPVPRLNPFPPL 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01806 559 PRINTS E-class P450 group I signature 342 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 362 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 102 121 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 405 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 487 497 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 126 147 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 497 520 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 220 238 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS E-class P450 group I signature 445 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 490 499 IPR017972 GO:0005506|GO:0016705
Viun1g01806 559 FunFam Cytochrome P450 family protein 66 547 - -
Viun1g01806 559 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 53 546 - -
Viun1g01806 559 CDD CYP93 106 549 - -
Viun1g01806 559 Gene3D Cytochrome P450 65 545 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS P450 superfamily signature 497 508 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS P450 superfamily signature 353 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS P450 superfamily signature 406 417 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 PRINTS P450 superfamily signature 488 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 SUPERFAMILY Cytochrome P450 75 552 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01806 559 Pfam Cytochrome P450 75 546 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01806 Viun-Chr1 29831113 29833207 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01806 41 552 Cytochrome P450 AT5G06900 50.195 0.0 537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01806 K24188 - gmx:100779342 930.628