Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01804 ATGGCATTTCAACTGTCACTGATTTGTTTGATCTCCACCGTTGTGACTGCATTCATACTATGGAGAAAACAAAAGAAGACCCTTCTTCCACCAACTCCAATGGCCCTCCCAATCATTGGTCACCTCCACCTTCTCTCCACAATACCTCACCAAGATTTTCACAACCTCTCTATCCGCTATGGACCCATCATGCACATTTTACTCGGCTCAGTCCCTTGTGTGGTGGCTTCAACCGCAGAAGCCGCCAAAGAGTTCCACAAAACTCATGAATCCTCCTTCTCCAACCGCCCTGCTCAAACCTTGGCCATTGAGACCTTAACCTACGGCTTCAAAGGCTTCACCTTCGCACCTTACGGACCCTATTGGAAGTTCATGAAGAAATTGTGCATGTCTGAACTTCTCGGTGGCCACATGTTAGAGCAGTTCCTTCCCGTGAGGCAGCAAGAGAACAAGAGGTTCATCCAACGCCTGCTCCAAAAAGGGGTGGCTGGTGAGGCCGTGGATTTTGAAGAAGAGTTGATGACACTCTCCAATAACATCGTGTCCAGAATGACTGTGGGTCACACCAGTACTGAAAAAGAGTTGACAAAGCTGGTGGCAGATGCCGCAGAGCTCCTGGGGCAGTTCAACATATCAGACTTCATTTGGTTCTTGAAGCGTTTCGATTTGCAGGGATTCAACGTGAGGCTCAAGAAAACTCGGGACAGGTTTGATGCTGTGTTGGACAGAATCATAAAGCAGCGTGAAGAGGAAAGAAGGAACAAGAAAGAAACCGGTGGAACACGTTCGTTTAACGATGTGCTTGATGTTTTGTTGGACATCTTCGAAGATGAGAGTTCTGAAATGAAACTAAACAAAGACAACATTAAGTCCTTCATCCTAGAAATATTTGTTGCTGGTACTGACTCAACTTCACTAACCATAGAATGGGCTATGTCGGAGTTAATAAACCATCCACATGTGTTGGAGAAGGCAAGGCTAGAAATAGATGCAATGGTTGGAAAGAGTAGAATCGTAGAAGAATCAGACATTAAGAACCTTCCTTACCTGCAAGCCATTGTTAAAGAAACATTAAGGCTTCACCCACCTTTTCCATTAAATCTTAGAGAGTCATCAACAAGTGAGGTGGTGTGTGGGTATAATATTCCGCCCAAAACTCGATTATTTATCAACATTTGGGCTATTGGCAGAGACCCCAATCAGTGGAAAAATCCTCTTGAGTTCATGCCAGAGAGGTTTATTGATGAAAATGGGCGTAGTGAATTTGATGTTAGGGGACAAAGTTATAATCTTCTTCCTTTTGGAAGTGGGAGAAGAAGGTGCCCTGGTATTTCTCTAGCATTACATGTTGTGCATGTGAATCTAGGTGCACTGATTCAGTGTTTCCAGTTAAAGGTTAATGGTGGAGATGGCAAGGTGGACATGGAAGAAAAACCTGGCCTCACTCTTCCAAGGGCTCACCCCTTAATCTGTGTCCCTGTTCCAAGGCTTAACCCATTCCCTTCTATGTGA 1512 0.4478 MAFQLSLICLISTVVTAFILWRKQKKTLLPPTPMALPIIGHLHLLSTIPHQDFHNLSIRYGPIMHILLGSVPCVVASTAEAAKEFHKTHESSFSNRPAQTLAIETLTYGFKGFTFAPYGPYWKFMKKLCMSELLGGHMLEQFLPVRQQENKRFIQRLLQKGVAGEAVDFEEELMTLSNNIVSRMTVGHTSTEKELTKLVADAAELLGQFNISDFIWFLKRFDLQGFNVRLKKTRDRFDAVLDRIIKQREEERRNKKETGGTRSFNDVLDVLLDIFEDESSEMKLNKDNIKSFILEIFVAGTDSTSLTIEWAMSELINHPHVLEKARLEIDAMVGKSRIVEESDIKNLPYLQAIVKETLRLHPPFPLNLRESSTSEVVCGYNIPPKTRLFINIWAIGRDPNQWKNPLEFMPERFIDENGRSEFDVRGQSYNLLPFGSGRRRCPGISLALHVVHVNLGALIQCFQLKVNGGDGKVDMEEKPGLTLPRAHPLICVPVPRLNPFPSM 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01804 503 CDD CYP93 61 493 - -
Viun1g01804 503 Pfam Cytochrome P450 30 491 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS P450 superfamily signature 432 441 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS P450 superfamily signature 441 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 SUPERFAMILY Cytochrome P450 30 496 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 434 443 IPR017972 GO:0005506|GO:0016705
Viun1g01804 503 Gene3D Cytochrome P450 17 490 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 57 76 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 441 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 431 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 391 415 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 81 102 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Viun1g01804 503 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 8 490 - -
Viun1g01804 503 FunFam Cytochrome P450 family protein 21 491 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01804 Viun-Chr1 29817707 29819858 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01804 7 496 Cytochrome P450 AT5G06900 48.290 2.99e-169 486
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01804 K24188 - gmx:100815706 758.059