Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g01802 | ATGGATTCCAATTCCCGTTACCAACTTCAGCAACAACACCAACCCAATTCCGGGTTGCTTCGCTTTCGCTCTGCCCCCACCCAAGTTCTCGCCAACTTCAAACAAGGCGAAGCTTCTTCCATCAACGGCAACCCCTGGGAGGGTTCTGAACCACTTTTCAGATTCTTCAATTCCGGCGACACCCTCGATACGACATCCCCTACCGTACGAGAATTCGTGGATAACAAGGTTTCTAACGACAATAAACAACCGAAGGAGTCAACAATATCGTCGTCGTCGCCATCATTATCACCTCTGAGTCGCATGAATTCCCAGCAAGGTTATAGTACTATTAATACTTCTGTGTTACCCTCTCGGTACCCGAGGCATGACTCTTCTGTAACTGTTTCTTCATCTATGATGCTGGGTTCTGTGGGAATGGATCAGAGCGGCAAAAGCTTTAATCCCAATCTTCTCAGGCAGAGTAGCTTCCCTTCTGGCAATTTCTCTAACAGCATCTCCTTTCACAACGGGTACGATGCTATGAAAGGTGTTGAAAACTTTGGTGGTGTTAATGGCAGTGATGGTGAGCATAGAATATCTATGAACAGAATGAAGAATCACATTAGCTTCTCACCTTCTTCCTTGGGAATTTTATCACCAACCTCTAAAATGTGCACGGAGGGTCTTAAAGTAACTAGCCCCGAGGATGGTAGACATGGAGGTAGCAATGGTGATGCTCGATATTACGGCTCTGGATTCCCTTACACTTCTTGGAATGAGACGTCAAACCCCAAAAGACAGCGAAATAGTAATGATGAGTTACTTTCTGAAGCTCAGAATGGAGAGCTGGGAAATCAGGTTCATTCTCTTTCGCATCATTTGAGTTTGCCAAGAACGTCCTCGGACATGTTTGCTATGGACAACTTGCTTCAGTTTAATGATTCTGTTCCTTGTAAAATCAGAGCAAAGAGAGGCTTTGCTACTCATCCTCGAAGCATAGCCGAAAGGGTGAGAAGAACTAGGATCAGTGAACGGATAAGAAAATTGCAAGAGCTTGTTCCAAACATGGAAAAGCAAACCAGCACAGCAGAGATGTTGGACTTGGCTGTAGACTACATAAAGAATCTTCAGAATCAATTCAAGAATCTGAGCGAAAGAAGGGCTAAATGCAAATGTATAAACATGCAGAAACCAGAAACAGATAAAATTGCATGA | 1197 | 0.4403 | MDSNSRYQLQQQHQPNSGLLRFRSAPTQVLANFKQGEASSINGNPWEGSEPLFRFFNSGDTLDTTSPTVREFVDNKVSNDNKQPKESTISSSSPSLSPLSRMNSQQGYSTINTSVLPSRYPRHDSSVTVSSSMMLGSVGMDQSGKSFNPNLLRQSSFPSGNFSNSISFHNGYDAMKGVENFGGVNGSDGEHRISMNRMKNHISFSPSSLGILSPTSKMCTEGLKVTSPEDGRHGGSNGDARYYGSGFPYTSWNETSNPKRQRNSNDELLSEAQNGELGNQVHSLSHHLSLPRTSSDMFAMDNLLQFNDSVPCKIRAKRGFATHPRSIAERVRRTRISERIRKLQELVPNMEKQTSTAEMLDLAVDYIKNLQNQFKNLSERRAKCKCINMQKPETDKIA | 398 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g01802 | 398 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 320 | 370 | IPR011598 | GO:0046983 | |
Viun1g01802 | 398 | MobiDBLite | consensus disorder prediction | 74 | 105 | - | - | |
Viun1g01802 | 398 | MobiDBLite | consensus disorder prediction | 221 | 240 | - | - | |
Viun1g01802 | 398 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
Viun1g01802 | 398 | Coils | Coil | 360 | 387 | - | - | |
Viun1g01802 | 398 | Gene3D | - | 322 | 392 | IPR036638 | GO:0046983 | |
Viun1g01802 | 398 | Pfam | Helix-loop-helix DNA-binding domain | 326 | 371 | IPR011598 | GO:0046983 | |
Viun1g01802 | 398 | MobiDBLite | consensus disorder prediction | 82 | 105 | - | - | |
Viun1g01802 | 398 | PANTHER | TRANSCRIPTION FACTOR BHLH83-RELATED | 65 | 391 | - | - | |
Viun1g01802 | 398 | CDD | bHLH_AtbHLH_like | 325 | 378 | IPR045239 | - | |
Viun1g01802 | 398 | FunFam | Transcription factor bHLH130 family | 321 | 390 | - | - | |
Viun1g01802 | 398 | Coils | Coil | 333 | 353 | - | - | |
Viun1g01802 | 398 | SMART | finulus | 326 | 376 | IPR011598 | GO:0046983 | |
Viun1g01802 | 398 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 323 | 387 | IPR036638 | GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g01802 | Viun-Chr1 | 29787150 | 29790140 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g01802 | 1 | 375 | Basic Helix-Loop-Helix Transcription Factor Gene Family | AT2G42280 | 41.162 | 5.91e-69 | 220 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | bHLH | Viun1g01802 | HLH | 3.6e-10 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g01802 | - | - | gmx:100814652 | 562.377 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Viun1g01802 | 1 | 29787150 | 29790140 | Viun1g01802 | 1 | 29787150 | 29790140 | ECH | |
Viun1g01802 | 1 | 29787150 | 29790140 | Viun7g04221 | 7 | 40625989 | 40630596 | ECH | |
Viun1g01802 | 1 | 29787150 | 29790140 | Viun7g00368 | 7 | 2599049 | 2602247 | PCT |