Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01751 ATGATCATGGCCGAATCATTTCTCTTCAGCATCGCCGATTCACTCATAGCAAAGCTTGCGTCTCAGCTTTATGAAGAAGCTTCTCGGGTGATGGGTTTGTATCAGCATCTGCAAGAGTTTACAAGAACTCTCTCATTAGTCAAAGCTGTGTTGTTGGATGCTGAGCAGAAGCAAGAGCACAACCACGAGCTGCGGGAATGGCTGAAGCAGCTGAAGCGTGTCTTCTCCGATGCCCAAGATGTGCTCGATGAAGTTGAGTGCCAAACGCTGCAAAATCAAGTTGTCAAAGCTCATGGTACCACCAAAACCAAGGTTGGTCGCTTCTTCTCAACCTCTAATCCACTTGTTTTTCGTTACAAGATGGCTCAACAAATTAAAGATATCAACAACAGACTAGACAAGGTTGCTGCTGATAGGCATAAGTTTGGTCTTCAAACAATTGATGTTGACACACGTGTTGTGCATCGAAGAGAGATGACACACTCCCATGTGAGTGATTCAGATGTGATTGGAAGGGAACATGACAAAGAAGAGATCATACATCTTTTGATGCAGAAGAATCCCATTGATGTTGATAAAAGTCTCCCTGTTATCCCCATTGTGGGAATGGGAGGTTTGGGAAAAACCACACTTGCAAAGTTTGTGTTTAATGATGCCAGGATAAACGAGTGCTTCCCATTAAAGATGTGGGTGTGTGTTTCAGAAAACTTTGACATTAAGCAAATGATTGTTAGAATTATCAATTCTGCTAACGATTCTGCTTCACACTCTCATGCTCCTGGTTTCCAACAGAATTTGAACATACTAGACATGGAGCAGCTGCAAAATCAATTGAGAAACAAACTTGTTGGTGAAAAGTTCTTACTTGTCTTGGACGATGTATGGAATGAAGACCGTGTTAAATGGGTTGAGTTGAGGGCTTTAATACAAGTAGGTGCTGCTGCAGGAAGTGCAGTTCTAGTGACTACTCGTAGTCACTCCATTGCATCCATGATGGGCACGGTTTCCTCTCACATTTTAGAAGGTCTTTCTTTGGAGGATTCAATATCTCTGTTTGTCAAATGGGCATTTAAAGAAGGAGAAGAGGAAAATTATCCTCATTTGATAAATATTGGCATAGATATTGTGAAAAAATGTAGAGGGATTCCATTGGCAGTGAGAACTATAGGGAGTTTATTATTTTCCAAATTTGAAGCAAATGAGTGGGAATATGTGAGAGACAGAGAAATTTGGAATTTACCGCAGAAAAAAGAGGATATTTTACCTACACTCAAATTAAGTTATGATCTTATGCCATCCTATTTGAGGCAATGCTTTGCTTTGTTTTCCCTTTACCCAAAGGATTATGAATTCGTTAATTTTGAGGTAGCTAATCTTTGGGGTGCACTTGGACTCCTTGGGTCTCTGAAAAAGAATATGACACAAGATGTTGCCAATCAGTATTTCTGTGAACTACAGTCAAGATCTTTTATTCAAGATTTTGTGAGCTATGGGACAGTTTATACATTTAAAATACATGATTTGGTGCATGATCTAGCCTTGTTTGTTGCAAAAGATGAGTGTCTACTAATAAATTCCCACGTTCAAAGTATACCTGAGAGTATTCGTCATCTGTCATTTGTCGAAAACGATTTGGATGACAAATCAATCAGTTCAAAATCAGTAGGTGTGAGAACCATTCTCTTTCCTAAGGATGGTGTTGGTGCCAAGAGTGAAGCTTTCTTTACATTGGTTTCAAGGTACAAATACTTGCATATTTTGAATTTAAGTTATTCTTCAGTTGAAACTTTGCCTTATTTCATTGGGAAGTTAAAACATTTGAGATCTCTCTGTCTTTATAATAACAAGAAAATCAGGGGACTCCCTGATTCTATTTGTAAGCTTCAAAGTTTGCAAGTGTTGGACCTTGGTGGATGCATGGAGCTGGAAGCATTACCCAAAGGATTAAGAAAATTGATCAGTCTTCGAGATTTTGTCATAACCACAAAGCAAGCTGTTTTGCCCGAGAATGACATTGCAAACTTGAGCTCTCTTCAGTATTTGACTATTCAATGTTGTGATAATGTGGAGTCTTTATTCTCAGGGATAGAACTTCCTTATCTGAAAGCATTGACTGTTAATAGCTGTAAGAGGCTAGAAGCTTTGCCACTTGACAGTAAGCATTTTCCTGCATTAGAGACGTTGTGTATTGGGAACTGTGACCAATTGGAATTGTCCAAGGGTCATGAAGACCAGAAGTTCATCTTAAAGTTAAAAGCAATACTATTTACTTCAATGCCACAGATAGAGACATTGCCTCATTGGCTTCAAGGATCTATTAAAACACTACTATCCTTGAGACTAGAACACTGCCACAATCTTGAGGTGCTTCCTGATTGGCTACCAATGGTAACTTGTCTGAAAGCACTTGACATCAAAGATTGCTCGAAGTTGCATTCTCTTCCAGATGGCATCAATTGCCTCACTGCCCTTGAACGTTTACAAATCATAGACTGTCCTGAATTATTCAGAAAATACACGCTGTAA 2526 0.3923 MIMAESFLFSIADSLIAKLASQLYEEASRVMGLYQHLQEFTRTLSLVKAVLLDAEQKQEHNHELREWLKQLKRVFSDAQDVLDEVECQTLQNQVVKAHGTTKTKVGRFFSTSNPLVFRYKMAQQIKDINNRLDKVAADRHKFGLQTIDVDTRVVHRREMTHSHVSDSDVIGREHDKEEIIHLLMQKNPIDVDKSLPVIPIVGMGGLGKTTLAKFVFNDARINECFPLKMWVCVSENFDIKQMIVRIINSANDSASHSHAPGFQQNLNILDMEQLQNQLRNKLVGEKFLLVLDDVWNEDRVKWVELRALIQVGAAAGSAVLVTTRSHSIASMMGTVSSHILEGLSLEDSISLFVKWAFKEGEEENYPHLINIGIDIVKKCRGIPLAVRTIGSLLFSKFEANEWEYVRDREIWNLPQKKEDILPTLKLSYDLMPSYLRQCFALFSLYPKDYEFVNFEVANLWGALGLLGSLKKNMTQDVANQYFCELQSRSFIQDFVSYGTVYTFKIHDLVHDLALFVAKDECLLINSHVQSIPESIRHLSFVENDLDDKSISSKSVGVRTILFPKDGVGAKSEAFFTLVSRYKYLHILNLSYSSVETLPYFIGKLKHLRSLCLYNNKKIRGLPDSICKLQSLQVLDLGGCMELEALPKGLRKLISLRDFVITTKQAVLPENDIANLSSLQYLTIQCCDNVESLFSGIELPYLKALTVNSCKRLEALPLDSKHFPALETLCIGNCDQLELSKGHEDQKFILKLKAILFTSMPQIETLPHWLQGSIKTLLSLRLEHCHNLEVLPDWLPMVTCLKALDIKDCSKLHSLPDGINCLTALERLQIIDCPELFRKYTL 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01751 841 Coils Coil 68 88 - -
Viun1g01751 841 Gene3D Ribonuclease Inhibitor 748 839 IPR032675 -
Viun1g01751 841 Gene3D Ribonuclease Inhibitor 520 747 IPR032675 -
Viun1g01751 841 Gene3D - 150 339 IPR027417 -
Viun1g01751 841 Gene3D - 342 427 IPR042197 -
Viun1g01751 841 Pfam NB-ARC domain 173 429 IPR002182 GO:0043531
Viun1g01751 841 PANTHER DISEASE RESISTANCE PROTEIN RP 64 832 IPR044974 GO:0006952
Viun1g01751 841 Gene3D - 12 126 - -
Viun1g01751 841 PRINTS Disease resistance protein signature 197 212 - -
Viun1g01751 841 PRINTS Disease resistance protein signature 281 295 - -
Viun1g01751 841 PRINTS Disease resistance protein signature 626 642 - -
Viun1g01751 841 PRINTS Disease resistance protein signature 379 393 - -
Viun1g01751 841 SUPERFAMILY L domain-like 504 833 - -
Viun1g01751 841 CDD RX-CC_like 4 136 IPR038005 -
Viun1g01751 841 Pfam Rx N-terminal domain 14 99 IPR041118 -
Viun1g01751 841 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 152 441 IPR027417 -
Viun1g01751 841 Gene3D - 428 514 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01751 Viun-Chr1 29300478 29303435 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01751 180 835 WRKY Transcription Factor Family AT5G45050 21.418 8.96e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01751 - - gmx:100805394 1207.59