Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01747 ATGGCCGAATATTTTGTCTTTGATATTGCTGAGTCACTGCTAAGGAAGCTTGCTTCTTTTGTTTGTGAAGAAGCTTCTCGTGTCTGTGAAGTGTACGAGGATATCAAAGGGATCAAAGATACTTTGTCAATTGTGAAAGGTGTGCTTTTGGACGCAGAGCATAAGAAGGAGCAGAGACATGGATTGCGTGAATGGATCAGACAGATTCAGACTGTATGCTTGGATGCTGAAGATGTGTTGGATGGACTTGAGTGCCAAAACCTCAGAAAGCAAGTTCTCAAAGCTTCAGACAGCACAAGGATGAAGGTAGCTCACTTCTTTTCTTCATCTAATTCTCTTGTTTTTCGTTTTAGGATGGCTCATCAAATCAAACACGTTAGACGTAGATTGGATAAGATAGCAGCTGATGGGAACAAGTTTGGTCTTGAGAGAATTGATGTTGACAACAGACTTGTCCAAAGGAGAGAAGTGACTTATTCCCATGTTGATGCTTCGGGGGTGATTGGGAGGGAAAGTGATAGGGAAGAAATTATCAAGCTTTTGATGCAACCTCACCCTCATGGTGATGGTTGTGGAGATGAAAGTGTTTGTGTTATTCCCATAGTGGGTATTGGAGGGTTGGGAAAGACCACACTTGCAAAGTTGGTGTTCAATGATAAGAGAATGGACGATCTTTTCCAGTTGAAGATGTGGGTGTGTATCTCTGATGACTTTGACATAAGGCAGATACTTATTAAAATCATCAACTCTGTTTCTGCTTCAGATCCAGCTCCAACTATTGCTCTTGCTCACCAAGAGAACATTAAAAACTTTGATATTGAGCAGCTACAAATTGTTCTTAAACTAAAGCTTTCTGGTCAGAAGTATTTTTTAGTCTTGGACGATATTTGGAATGATAATCGTGCAAAATGGATAGAGTTGAAAGATTTAATTAAAGTGGGTGCAGTTGGAAGCAAAATCTTGGTGACAACACGAAGTAACTCAATTGCTTCAATGATGGGCACTGTTCCCTCGTACGTTTTGGAAGGTCTTTCCATGGAGAATTGTTATGCTCTGTTTAACAAATGGGCATTTAAGGAAGGCGAAGAAAAAGCATATTCAAATCTAGTAGAGATTGGAAAAGAAATTGTGAAAAAATGTAGAGGGGTTCCACTAGCAGTGCGAACATTAGGGAGTTCTCTGTTCCTAGTTTTTGATTTAGAGAGGTGGGAATTTGTAAGAGACCATGAAATATGGAACATAAAACAAAACAAAGATGACATTTTACCCGCTCTTAAGTTGAGCTATGACCAAATGCCTTCTTGTTTAAGGCACATTTTTGCGTTCTTTTCTCTTTATCCTAAAGATTATGGCTTTTGTAGTGCTGAAATTCTTATTCTTTGGGAGTCACTTGGATTACTTCAATCTTTAGGTGGAAATCGAAAGCTTGAGAATATTGCAAGGCAATATATTGATGAGTTACATGCAAGATCATTTCTTGAGGATTTTGAGGACTTTGGCCACTATTACTATTTCAAGGTACATGATTTGGTACACGATCTTGCTCTGTTTGTTGGGAAAGAGGAACATCTAATGGTAAACTCATTTACTCGTTATATACCTGAGCAAATAAGGTATTTATCAGTTGTTGAAAATGATTCACTTAACTACGTTTTGTTCCCCAAATCCAGCAGAGTGAGAACTATTCTATTTCCCTTAAAAGGAACCGCCGTAGAAAGTAAAACTCTTCTGCATACTTGGACAACAAGATACAAACACTTACGGTTTTTAGATTTAAGTGACTCATCTTTTGACACATTGCCTAGTTCAATTGCTAAATTGAAGCATCTGCGAACTCTCTTTCTAGATAAATGCAAAATAAAAAGACTTCCTCATTTTCTATGCAAACTGCATAATTTGCAAATTTTGTCTCTCAGAGGATGCATGGAGCTTGAAACATTGCCTAAAAGCTTAGGGATGTTAATCAGCCTTCGAAAATTGTATATAACCACAAAACAATCTATTCTGCCTGAGAATGAATTTGCAAGCTTGAGAAATCTTCATACTCTGAGTTTTGAATATTGTCCCAATTTGAAGCTTTTGTTCAGAAAGGAACAACTCGCTTTACTTGAAGTTTTGATCATTCAATCATGTAGGAGCCTAGAGTTTTTACCTCTTCATGTTCTTCCTAAACTGGAGGTTCTGATTGTATCAAGATGTGAGATGCTAAATTTGAACTATGGAAGTCCAATCCACAGATTGAGGATGAAATTCCTGCATATTGAACATTGTCCGAAGCTGCATACATTGCCTCAATGGATTGAAGGATCAGTTGAGACTTTGCGGACATTATTAATCTTGAATTGTCACACTCTTAAGATGTTTCCTGAGTGGATCACAACAATGAGTGGTCTTAAGAGGCTCCATATTGTTAACTGTCCCAAACTGTTGTGTCTCCCTGGTGAAATGCATAGCCTCACTGCCCTCGATGATTTGACCATAGAGGGTTGTCCTGAACTGTGTAGAAAATGTGAGCCAAAAAATGGTGAGTTCTGGTCTTTCATCGCACACATCAAACGCGTTTCAATTGGAGAAACAAGAAAAGGGAAACTCCTTGTTCGAATGCTGCAGCAGATGCGGCTAAGATTGCGCGATCAGTAA 2640 0.3856 MAEYFVFDIAESLLRKLASFVCEEASRVCEVYEDIKGIKDTLSIVKGVLLDAEHKKEQRHGLREWIRQIQTVCLDAEDVLDGLECQNLRKQVLKASDSTRMKVAHFFSSSNSLVFRFRMAHQIKHVRRRLDKIAADGNKFGLERIDVDNRLVQRREVTYSHVDASGVIGRESDREEIIKLLMQPHPHGDGCGDESVCVIPIVGIGGLGKTTLAKLVFNDKRMDDLFQLKMWVCISDDFDIRQILIKIINSVSASDPAPTIALAHQENIKNFDIEQLQIVLKLKLSGQKYFLVLDDIWNDNRAKWIELKDLIKVGAVGSKILVTTRSNSIASMMGTVPSYVLEGLSMENCYALFNKWAFKEGEEKAYSNLVEIGKEIVKKCRGVPLAVRTLGSSLFLVFDLERWEFVRDHEIWNIKQNKDDILPALKLSYDQMPSCLRHIFAFFSLYPKDYGFCSAEILILWESLGLLQSLGGNRKLENIARQYIDELHARSFLEDFEDFGHYYYFKVHDLVHDLALFVGKEEHLMVNSFTRYIPEQIRYLSVVENDSLNYVLFPKSSRVRTILFPLKGTAVESKTLLHTWTTRYKHLRFLDLSDSSFDTLPSSIAKLKHLRTLFLDKCKIKRLPHFLCKLHNLQILSLRGCMELETLPKSLGMLISLRKLYITTKQSILPENEFASLRNLHTLSFEYCPNLKLLFRKEQLALLEVLIIQSCRSLEFLPLHVLPKLEVLIVSRCEMLNLNYGSPIHRLRMKFLHIEHCPKLHTLPQWIEGSVETLRTLLILNCHTLKMFPEWITTMSGLKRLHIVNCPKLLCLPGEMHSLTALDDLTIEGCPELCRKCEPKNGEFWSFIAHIKRVSIGETRKGKLLVRMLQQMRLRLRDQ 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01747 879 Gene3D - 343 427 IPR042197 -
Viun1g01747 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 149 442 IPR027417 -
Viun1g01747 879 Gene3D - 149 338 IPR027417 -
Viun1g01747 879 PRINTS Disease resistance protein signature 283 297 - -
Viun1g01747 879 PRINTS Disease resistance protein signature 380 394 - -
Viun1g01747 879 PRINTS Disease resistance protein signature 628 644 - -
Viun1g01747 879 PRINTS Disease resistance protein signature 198 213 - -
Viun1g01747 879 Gene3D - 428 516 IPR036388 -
Viun1g01747 879 Gene3D - 10 124 - -
Viun1g01747 879 Pfam NB-ARC domain 195 430 IPR002182 GO:0043531
Viun1g01747 879 Gene3D Ribonuclease Inhibitor 522 738 IPR032675 -
Viun1g01747 879 Pfam Rx N-terminal domain 11 100 IPR041118 -
Viun1g01747 879 Gene3D Ribonuclease Inhibitor 744 841 IPR032675 -
Viun1g01747 879 CDD RX-CC_like 12 134 IPR038005 -
Viun1g01747 879 SUPERFAMILY L domain-like 506 854 - -
Viun1g01747 879 PANTHER DISEASE RESISTANCE PROTEIN RP 54 830 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01747 Viun-Chr1 29255212 29258195 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01747 199 833 WRKY Transcription Factor Family AT5G45050 21.785 6.78e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01747 - - gmx:100794422 1317.37