Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01738 ATGGGTGAACGATGTCATTCAGATGCTCCGTTAGATATTATTTCCATTGGGAATGAGGAACACTTGATCTCTCGTTTGCCAAAAGAATGTAAGATTGGATCCATTAGTTTGGATGAAAATGATGATGATTATCCTGTGCCACGACCTGGAATGATCTTTAGGTCAGAAGCTGAGGCAAGATTGTATTACACAAAATATGCCGACCAAATGGGCTTCAGCGTCAAGACTAGAACCTCAAAAAGGGGAGGTGAAGGCAAAGTTAAATATTTGATACTTGTATGTTCCGAGAGATCAAGAACTGCTATTGATGAATCAAAGAAACAGTATTGTACTGCTAGGATAAATTTGACTTTACGCAAAGATGGAACCTATCAAATTAGTGCAGTTACTCTCGGTCATAATCATGAATTGGGTTCTCAGAGAATTACTATTGAGATGAAGTGTATAAGGAAATTGGATCCAGAAGTTATTGACATGGGTGTTAAGAAGATCTCAGAGCAAAATAATTGCGGAAATTACCTTCAGATAGAAAGACATTGGATTAGAGAAAATGGAGATGGTGATGCCCTACAGAAGTATTTGGTGAGGATGCAAGAACAAGATAGAAACTTCTTCTATGCAGTTGACTTGGATGATATGTTCAGCGCGAAGAATGTTTTTTGGTCTGATGGAAGGAGTAGAGCTGCATATGAATCGTTTGGTGATGTGGTGACAGTTGATACTACATGCCTTTCCAATCACTACAAAGTGCCACTTGTAACTTTCATTGGAGTTAACCATCATGGGCAATCTGTGCTGTTTGGTTGTGGGTTGTTATCATCTGACGACTCAGAGTCATTTGCTTGGTTGTTCGAATCATTGTTGCATTGCATGTCTGGTGTACCCCCACAAGGAATCGTAACAGATCATTGCTGCAGGGCCATGCAGAAAGCACTTGACACTGTATACCCCTCCATTCGACATCGGTGGTGTTTGTCAAATATAATGGAAAAGCTTCCCCAACTGATCCATGAGTATGCTAATTGCAAGTCCTTAAGAGATCGTATGCATAGTGTAGTCTATGACACACCAACAACAGATGAATTTGAGGGGAAATGGAAGAGGATTGTGGAGGATTTTGGCCTCAAAGACAATAAATGGTTGAAGGAATTGTTCCTTGAGCGACATCGCTGGGCTCCTTCCTTTGTACGAGGTGGTTTTTGGGCTGGAATGTGTACTAATCCGCAAAGTGAAAGTAGGCATGCAATTTTTGACGGATTTATAAACCAACAAACAACTTTGAAGCAATTTGTTGATCAGTACAATAATGCCTTGCAATATAAGGCTGAGAAGGAGTATATAGCTGACATACATTCATCCAGTAACAGTCAGACTTGTGTTACCAAATCTCCACTTGAGAGGCAGTTTCAATCTGCTTACACTCATGCCAAGTTTCTGGAGGTTCAACGTGAATTTGTTGGAAAGGCTGATTGTAACGTTTTTGTTGCTTGTGAAGATGGTTCTATTTGTCGCTACAATGTGATAGAGGATATGATAACAGAGGATAAGCCTAAGGAATCCGTGGTTGAAGTCATATATAACAGGGAAGATTGTGATATAAAATGCAATTGTCGGTTGTTTGAGTTGAGAGGTATACTTTGTAGGCACTCGCTTGCAGTACTGTCACAAGAGAGAGTGAAGGAGGTGCCCTGTAAATATATTTTAGACAGATGGAAGAAAAATATTCTGAGGAAGCATGTTTGTATAAAAACCAGCTATGGTGTTGTGCATTTTGAACCTCAAGTGCAGAGGTTTGATCTGTTATGCAAACAATTCAATAGTATTGCTGCTGCTGCTGCTGAATTTGAGGGTACAAGTTCTTTTGTAAAGGATACCCTCTGCAACTTGAAGGAGAAACTTGACTCATGGACATCGTTATCGATAAGCTCTTCTCTTGTGGATGTAGAGAAACACAATAATATGATACATTGA 1971 0.3978 MGERCHSDAPLDIISIGNEEHLISRLPKECKIGSISLDENDDDYPVPRPGMIFRSEAEARLYYTKYADQMGFSVKTRTSKRGGEGKVKYLILVCSERSRTAIDESKKQYCTARINLTLRKDGTYQISAVTLGHNHELGSQRITIEMKCIRKLDPEVIDMGVKKISEQNNCGNYLQIERHWIRENGDGDALQKYLVRMQEQDRNFFYAVDLDDMFSAKNVFWSDGRSRAAYESFGDVVTVDTTCLSNHYKVPLVTFIGVNHHGQSVLFGCGLLSSDDSESFAWLFESLLHCMSGVPPQGIVTDHCCRAMQKALDTVYPSIRHRWCLSNIMEKLPQLIHEYANCKSLRDRMHSVVYDTPTTDEFEGKWKRIVEDFGLKDNKWLKELFLERHRWAPSFVRGGFWAGMCTNPQSESRHAIFDGFINQQTTLKQFVDQYNNALQYKAEKEYIADIHSSSNSQTCVTKSPLERQFQSAYTHAKFLEVQREFVGKADCNVFVACEDGSICRYNVIEDMITEDKPKESVVEVIYNREDCDIKCNCRLFELRGILCRHSLAVLSQERVKEVPCKYILDRWKKNILRKHVCIKTSYGVVHFEPQVQRFDLLCKQFNSIAAAAAEFEGTSSFVKDTLCNLKEKLDSWTSLSISSSLVDVEKHNNMIH 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01738 656 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 37 634 IPR031052 GO:0006355
Viun1g01738 656 Pfam FAR1 DNA-binding domain 62 137 IPR004330 -
Viun1g01738 656 Pfam SWIM zinc finger 531 555 IPR007527 GO:0008270
Viun1g01738 656 ProSiteProfiles Zinc finger SWIM-type profile. 520 558 IPR007527 GO:0008270
Viun1g01738 656 SMART 26again6 533 560 IPR006564 GO:0008270
Viun1g01738 656 Pfam MULE transposase domain 236 330 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01738 Viun-Chr1 29150085 29152906 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Viun1g01738 MULE 1.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01738 - K17604 gmx:102660547 1040.41