Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01715 ATGAAGAAGAAGAAGAAGGAGCAAACACTTATAGTTTACTATACAATGGAGTTGAAGGTGGTGATGCTGCTGCTGCTGGTCATTGCGTTAGCAAGAACAGCAACTGCAGCAGTTGACCAAGCCCTGCCCGGCTGCCTGAACAAATGCGGAAATGTTTCAATTCCGTACCCCTTTGGCGTAGGTAAAGTCGCCGGAAACAACTGTTTCTTGGAAGAAGACTTGGAACTCAGCTGCACAAACGCCATTCTATACACAGATAAAATCCCAGTTCGGAACATAACCCTCCTAGGTCAATTGGAGATGGATTTCTTCGTCTCTTCTATCTGCAAACAAAGCATTTCTAAAGGAGAAACAGCCAACGAACCCACACTCCAAACTGCATCCTTCACCATTTCCAGCACGGAAAACAAGTTCGTGAGTATAGGCTGCGACACCTACGGGTATCTCAACAGTTACGTCGACGAAGCTAAATACTCAACAGGCTGCTTAACAAGATGTGACAACAAGAATGAAGAGAAGATGGAAAACATGCAGGGAAGTGACGGCAAATGTTCGGGCATAGGGTGCTGCCAGGTGGATATACCTCCTGGAATGAATAACATCAGTATACAAGCTTACTCCTTTCATGATTTCAAGTACTCTTCCAATCCCAACAGCTGCAGCGTTTCGTTTGTCGTCAAAAATGGCGGCTACAATTTCTCCAGGGATGATTTGAATCGCGTCCCGCTCGACGAGGCTCCCATGATTGTTGATTGGAGAGTTGGAGAAGCTGCCTGTAACGTTTCCAAGGACAAAACTAAGTATGCATGCATAAGTGATAATAGCTTTTGCGAGGACCCACCCTCTGCCGCTGGAAATGGCTACCTCTGCAAATGTAAACCAGGTTTTCAGGGCAACCCTTACCTTTCCCAAGGTTGCACAGACTTCCCAGATTGTAAAATGGGGACCCACAACTGCGCAAGAGCAGAGTATTGTCATGAAACTCCTGGCTCTTTCGAATGTTTATGTCCTGCTGGGATGATCGGAAATGCAACAAACGAAGGTGGAGGATGCCAGCCAAAGCAGCAAGCTGATGAATTTACCAAGATCGTCATTGGAGCAGGTGTAGGATTAATTGCTTTGTTTGTGGGGGTTTCTTGGCTTTACTTAATGCTCCAGAAAAGGAGAGTCCTAAAACTAAAGGAAAAGTTCTTTCAGCAGAATGGGGGCATCATTTTAAGACATAAACTCTCTACAACAAGAGACTCATCTCAATCCACCACAATTTTCAATGCTGAGCAACTTAATAAAGCTACCAACAATTTTGATGAGAATTTAATCATTGGCAAAGGAGGTTTTGGAACAGTTTTCAAAGGAGTTCTCTCAAATAATCAAGTTGTTGCTATCAAGAAGTCAAAAATAGTGGATGCGAGCCAGGTGGAGCAATTCATCAATGAGGTCATTATACTATCACAGATTAATCACAGAAATGTAGTCAAACTTTTGGGTTGTTGTCTAGAGACAGAAGTTCCATTATTAGTATATGAATTTGTTAAAAATGGCACCCTTTTTGATTATTTGCATAAACAAGGTCAAGTGGGTAATGTATCTTGGAAAACATGTTTAAGGATTGCCACTGAAGCAGCTGGAGCTTTGTCATATCTACACTCTGCAGCTAGTATACCCATCATCCATAGGGATGTGAAAACTGCGAATATACTCTTAGATGACAATGGCGCTGTCAAAGTTTCTGACTTTGGAGCTTCACGATTGGTTCCACAAGACCAAACTGAAATAGCCACAATTGTGCAAGGAACCTTTGGGTATTTAGACCCAGAGTATATGCAATCAGGCCAATTGACTGAAAAGAGTGATGTGTATAGCTTTGGGGTAGTGCTTGTAGAACTGCTAACTAAGGAGGAGCCTTTCTCTTTTCAGAGGACAGAAGAAAAACGAAGTCTTACGTTTCACTTTGTATGTAGCTTGGAAGAGGATAATTTGTTTGATGTTGTTCAAATTGATGATGAGGATGAAGAAAATAAACACGAGATTATGCAGGTTGCTATTCTTGCTGCGAGGTGCTTGAAACTTAGAGGGGAGGAAAGGCCTAGCATGAAGGAAGTGGCAATGGAATTGGAGGGAGTGATGCTTATGAACAAACACCCTTGGACCAATTCAAGCCACACTTTTGAGGAGAGACAATACTTGCTTTCTGAGGCACAAAGCATTTGTGAACCTGGTGACAGTAGTGGCCAACAAAATACTAGATATGATAGTGCGAGAGAGCTTCAATTAATTGACTTTGGTAATGGAAGATGA 2298 0.4256 MKKKKKEQTLIVYYTMELKVVMLLLLVIALARTATAAVDQALPGCLNKCGNVSIPYPFGVGKVAGNNCFLEEDLELSCTNAILYTDKIPVRNITLLGQLEMDFFVSSICKQSISKGETANEPTLQTASFTISSTENKFVSIGCDTYGYLNSYVDEAKYSTGCLTRCDNKNEEKMENMQGSDGKCSGIGCCQVDIPPGMNNISIQAYSFHDFKYSSNPNSCSVSFVVKNGGYNFSRDDLNRVPLDEAPMIVDWRVGEAACNVSKDKTKYACISDNSFCEDPPSAAGNGYLCKCKPGFQGNPYLSQGCTDFPDCKMGTHNCARAEYCHETPGSFECLCPAGMIGNATNEGGGCQPKQQADEFTKIVIGAGVGLIALFVGVSWLYLMLQKRRVLKLKEKFFQQNGGIILRHKLSTTRDSSQSTTIFNAEQLNKATNNFDENLIIGKGGFGTVFKGVLSNNQVVAIKKSKIVDASQVEQFINEVIILSQINHRNVVKLLGCCLETEVPLLVYEFVKNGTLFDYLHKQGQVGNVSWKTCLRIATEAAGALSYLHSAASIPIIHRDVKTANILLDDNGAVKVSDFGASRLVPQDQTEIATIVQGTFGYLDPEYMQSGQLTEKSDVYSFGVVLVELLTKEEPFSFQRTEEKRSLTFHFVCSLEEDNLFDVVQIDDEDEENKHEIMQVAILAARCLKLRGEERPSMKEVAMELEGVMLMNKHPWTNSSHTFEERQYLLSEAQSICEPGDSSGQQNTRYDSARELQLIDFGNGR 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01715 765 Pfam Protein kinase domain 439 701 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g01715 765 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 37 709 IPR045274 GO:0007166
Viun1g01715 765 ProSitePatterns Serine/Threonine protein kinases active-site signature. 556 568 IPR008271 GO:0004672|GO:0006468
Viun1g01715 765 Pfam Wall-associated receptor kinase galacturonan-binding 45 95 IPR025287 GO:0030247
Viun1g01715 765 Gene3D Phosphorylase Kinase; domain 1 401 510 - -
Viun1g01715 765 Gene3D Transferase(Phosphotransferase) domain 1 511 729 - -
Viun1g01715 765 ProSiteProfiles Protein kinase domain profile. 435 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g01715 765 ProSitePatterns Protein kinases ATP-binding region signature. 441 464 IPR017441 GO:0005524
Viun1g01715 765 SUPERFAMILY EGF/Laminin 308 343 - -
Viun1g01715 765 FunFam Wall-associated receptor kinase 2 405 510 - -
Viun1g01715 765 FunFam Fibrillin 2 303 347 - -
Viun1g01715 765 SMART egf_5 258 307 IPR000742 -
Viun1g01715 765 SMART egf_5 311 352 IPR000742 -
Viun1g01715 765 FunFam Wall-associated receptor kinase 2 511 728 - -
Viun1g01715 765 Gene3D Laminin 258 351 - -
Viun1g01715 765 CDD EGF_CA 308 342 - -
Viun1g01715 765 CDD STKc_IRAK 441 707 - -
Viun1g01715 765 SMART serkin_6 435 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Viun1g01715 765 SUPERFAMILY Protein kinase-like (PK-like) 414 705 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01715 Viun-Chr1 28938989 28943170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01715 18 765 Receptor kinase-like Gene Family AT1G21230 41.809 0.0 549
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Viun1g01715 Pkinase 4.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01715 - - gmx:100819535 986.097