Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01714 ATGGTGATGGTGATGTGGGAAGATGTAACAGTTGAACGAGCTGCAAGTTTTGGAGCACAGAAGAGGAAGTTGCTGCTTAATGGAATCACTGGTTTTGCTGAACCTGCTAGAGTTATGGCTGTTATGGGTCCTTCTGGCTGCGGAAAAACCACCTTTCTTGACTCTTTCACTGGAAAACTTGCTCCAAATGTTGTTGTGACAGGGAACATTCTAATCAATGGGAAGAAAAACTTGAATTCAAGAGATGTGTCCTATGTAGCTCAAGAGGAACTTTTGTTGGGAACTTTGACTGTAAAAGAGACTCTGACATTCTCTGCAAACATGAGACTTCCTTCCAAAATGAGCAAAGAAGAGATAAACAAAGTGGTGGAAGAAACCATAATGGAAATGGGTCTGGAGGATTGTGCAGATACAAGGATTGGGAATTGGCATTGTAGGGGTATTAGTAATGGTGAAAAGAAGAGACTGAGCATTGGCCTTGAGATTTTAACACAACCCCATGTCTTACTTCTTGATGAACCTACAACTGGCCTTGATAGTGCCTCAGCTTTCTATGTCATTCAAGCACTATGTCACATTGCTCAGAGAGGAAAGATAGTTATCTGCTCCATTCACCAACCCAGCAGTGAGATTTTTGAACTGTTTGATGATTTGCTCTTGCTTTCATGTGGGGAAACTGTTTATTTTGGAGAAGCAAAGAAGGCTCTGAAGTTTTTTGCCGATGCAGGGTTTCCCTGTCCTACTAGAAGAAATCCTTCAGATCATTTTCTTATGTGTATTAATTTGGAGTTTGACTTCATTACTGAAGTACTAGAGAGGACACAATTATGTTTGGCATCATCGAAGTCAACAATGGAAATGAGAATATCAGAGATCAGAAGGACACTGATCGAGACTTACAAAAGTTCAAAGCTAATGTTCAATGCAAGAACAAAAATTCAACAAATGAAACACAATGAAGAACAAGGAATTGAGCACTACACAGGTAGCACTACCACGTGGAGGAAGCAATTGTGTACATTGACCAAGCGATCTTTTCTGAACATGACTAGGGACATTGGTTATTACTGGTTGAGGATAATATTCTACATAATGGTAGGAATCAGTATTGGCACCCTCTTTTTTCACATTGGCACAGGAAACAGCTCAATCTTGGCTAGAGCAAAGTGTGTATCCTTCATCTATGGCTTCATGATTTGTTTGTCATGTGGAGGATTACCATTTTTCATTGAAGAACTGAAGGTGTTCTATGGTGAAAGATCCAAAGGGCATTATGGAGAGGCTGTGTTTGTAGTATCAAACATCATATCATCATTCCCTTTCCTTGTTCTAACATCTTTTTCCTCTGGAACAATCATTAACTTCATGGTGCAATTTCATCCGGGTTTAACTAATTATGCATTTTTCTGTATCAACTTATTCTTCTGCCTATCTGTTGTCGAGTGTTGCATCATGGCTGTGGCCTCACTGGTCCCCAATGTGCTGATGGGCATAGGAACGGGAACTGGTGTAATTATCTTCATGATGATGCCCTCCCAAATATTCAGATCATTACCTGATCTTCCAAAATTCTTTTGGCGCTATCCCATGTCCTACCTCAGTTTTGCTTCCTGGGCAGTGCAGGGAGAATACAAGAATGACATGCTGGGGGTTGAGTTTGATCCTTTGCTACCTGGTGATGCGAAGGTTAGTGGAGAAAAAGTTCTGTTATTGGTACTTGGGGTTCCATTGGATCATAACAAATGGTGGGACTTAACAGCATTGGCTACCTTATTATTAGTTCACAGAGTGGTTCTTTACTTGGTGCTTCGGTTTGTCAAAAGAGCAAAATCACCTAATCTGTGGTTCTATGCCAAGAAAAGTTTACACTTTGGAAAGAGATGTTTGGTCAATGACAAGCCATCTATCTCTTCCAGGAAACTAGCTCAGCATCCATTATCGTCTCAAGAGGGTCTTATGTCCCCAAACCTTGCAATGTAA 1980 0.4066 MVMVMWEDVTVERAASFGAQKRKLLLNGITGFAEPARVMAVMGPSGCGKTTFLDSFTGKLAPNVVVTGNILINGKKNLNSRDVSYVAQEELLLGTLTVKETLTFSANMRLPSKMSKEEINKVVEETIMEMGLEDCADTRIGNWHCRGISNGEKKRLSIGLEILTQPHVLLLDEPTTGLDSASAFYVIQALCHIAQRGKIVICSIHQPSSEIFELFDDLLLLSCGETVYFGEAKKALKFFADAGFPCPTRRNPSDHFLMCINLEFDFITEVLERTQLCLASSKSTMEMRISEIRRTLIETYKSSKLMFNARTKIQQMKHNEEQGIEHYTGSTTTWRKQLCTLTKRSFLNMTRDIGYYWLRIIFYIMVGISIGTLFFHIGTGNSSILARAKCVSFIYGFMICLSCGGLPFFIEELKVFYGERSKGHYGEAVFVVSNIISSFPFLVLTSFSSGTIINFMVQFHPGLTNYAFFCINLFFCLSVVECCIMAVASLVPNVLMGIGTGTGVIIFMMMPSQIFRSLPDLPKFFWRYPMSYLSFASWAVQGEYKNDMLGVEFDPLLPGDAKVSGEKVLLLVLGVPLDHNKWWDLTALATLLLVHRVVLYLVLRFVKRAKSPNLWFYAKKSLHFGKRCLVNDKPSISSRKLAQHPLSSQEGLMSPNLAM 659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01714 659 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 240 IPR027417 -
Viun1g01714 659 MobiDBLite consensus disorder prediction 640 659 - -
Viun1g01714 659 Pfam ABC transporter 33 175 IPR003439 GO:0005524
Viun1g01714 659 Gene3D - 6 242 IPR027417 -
Viun1g01714 659 Pfam ABC-2 type transporter 205 258 IPR043926 GO:0140359
Viun1g01714 659 Pfam ABC-2 type transporter 337 542 IPR013525 GO:0016020|GO:0140359
Viun1g01714 659 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 3 618 - -
Viun1g01714 659 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 4 248 IPR003439 GO:0005524
Viun1g01714 659 SMART AAA_5 35 224 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01714 Viun-Chr1 28915541 28921730 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01714 33 217 Calmodulin-binding Proteins AT2G36910 26.904 2.33e-10 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01714 K05681 - gmx:100802207 1117.83