Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01711 ATGGAGGGTGGTACGATAGATAAGACTCGTGATTTCAACATGGCTTCAAGAAAAGCTGAAGAAGCGGCTTGCAGACGCTATAAGGCAACTCAATGGCTAGAAAGCCTAGTGGGTCCTCTTGGTATATCGAGCCAGCCTACAGAGAGAGAACTCATTTCTTGCTTGAAAAATGGTTTGATTCTTTGCAATGCCATTAACAAGATTCATCCAGGAGCAGTGCCTAAAGTTGTGGTTGTGGATAATCAAATGACGTCACAACCACTTACCTGGGATTCTCAGCCATTGCCCGCCTATCAGTATTTCGTAAATTTACGCAACTTTCTTGCTGCAATGGAGGAATTAAATCTTCCGGCTTTTGAAGCTTCTGATCTTGAAAGGGATACACTAGAGATGGGATCGGCAGCCAAAGTGGTTGATTGCATTTTGGCACTTAAATCGTTTCAAGAGTTGAAGCAGATGAACAATCAGAATGGATACAACAAATACATAAAATCTCCTTTACCTATGAGAATGCATTCAAGACCTGCAGCTGCACCACCCTCTGATGCTTGTAGGCACTTGGATTTGTCTACCACAATGGAAAAGATTCCTCCCTCTGAGAGTAATTTTTCAAATCGAGAAGAAATTGTGGAATTACTTGCCAAGCAACTAGTTGACCGTATGTTAGACGCCAAAGAAAATATTGATGGAAATATCATTGCTTCTCTCCGTAAAGAACACCTGGTAGAGGATCCAATAAAGGTTTTTAATCAGATAATGGCATGTTGTAATGGGGAACAACCACCTACAAGATTGCGTGAGGATTTTGATAAAGAACAGGGGTTATCACTTCATTCCACATCTACACAATCTGATGTTTTATCTGCTCCTGACAATTCTAAGCGTTGCCAAACTTGTCCCGGAAAATGCAAGTGCAGCCAGGAGCATCTCTTAAACATGCAGGAAAAAGAACTTGTGGATCTCAAGGCTTTGAAGTTGAAAATTAAGAAAGAGTTTGAAGAGATGCAGTCACAGTTTCAAGGATTTTTTTATGACATTGGAAGTCAAATACAGGAGATGTCAACTAAAGCTATTGGATATCACAGAGTAGTAGAAGAGAATAGGAAACTATACAATATGGTCCAAGATTTGAAAGGTAATATTCGAGTTTACTGCAGAATCAGGCCATCATTCCGGGCTGAATCAAGGAATATTGTTGATTTTATTGGGGAAGATGGTTCTCTATTCATTTTAGATCCATCAAAAACACTCAGAGATGGAAGGAAACTTTTTCAGTTTAATCGTGTTTTTGGTCCAACGGCTGGCCAAGATGAGGTTTACAAGGATACTCAACCATTGATTAGATCTGTGATGGATGGATACAATGTTTGTATTTTTGCTTATGGCCAAACTGGGTCTGGGAAGACTCACACCATGAGTGGTCCTTCAGGTGGAACATTTAAGGATATGGGAATCAATTATCTGGCTCTTAATGATCTGTTTCAAATGTCTAATGAAAGGAATGACATCATAACTTATGACATTTATGTTCAAATGGTTGAGATTTACAATGAACAAGTTAGAGATCTACTTGCAGAAGACAAAACTGACAACAAATTAGAAATCCGGAGCTGCAATGACGATGGGATGAGCCTTCCAGATGCTAAATTGCGTCCTGTGAAGTCTACAAATGATGTTATGACCCTTATGAAACTTGGTGAGGTTAATCGCGCTGTCAGTTCGACTGCAATGAACAACAGGAGTAGTCGTTCCCACAGTGTACTTACTGTGCATGTTCATGGCAAAGATACATCCGGGAGCTCCATTCGCAGTTGCTTGCACTTGGTAGACCTAGCTGGAAGTGAACGAGTAGACAAGTCTGAAGTTACAGGGGAAAGACTAAAGGAAGCACAATTTATTAACAAATCTCTTTCTTGTTTGGGAGATGTGATCACAGCCCTGGCTCAAAAGAATTCTCACATACCTTACAGGAACAGCAAACTCACTCTTCTTTTGCAAGACTCCTTAGGTGGACATGCAAAAACATTGATGTTTGCTCACGTGAGTCCGGAAGCAGATTCCTTTGGTGAAACAGTGAGTACTTTAAAGTTTGCTCAGAGGGTTTCCACTGTGGAACTTGGGGCAGCCCGTTTGAACAAAGAAAGCAGTGAGGTTATGCAACTTAAAGAACAGGTTGAGAACCTTAAGATTGCATTGGCAACCAAGGATGCTCAGAGAATGTTCCAAAGAAATAGAGAGCCGCACACTCCATCAGAGAAAACTCCATTGCCCTCTCGGAGACTTAGCATTGAGAACTGCAGCGCCATACAGACCGATAAATCTGTGAGTAGAGAGGATAGAAGTGGAGCTAAATCACCACTTTTGTTACCTCGTTCCAGAAGATTAAGTTTGGAAGGTCCAAAAACTATCAAGAAAGATGGTCTACAGTATGAGCCAGTATCAATGCAGAAATATCGCCCAATGCAAGATGTAGAGGCCGTGTCAAAACTAAATGGCCAGTTCAGCAGTGGCAATGCCAAAACCCCTCGAAGTCCTACAAGCATTTCCTATCAAACGAGATTGATAAAATTAAATGATGGCATGCAAGTTCATCCTATTAAACTGCCTCAAACACCTGAACCATCCGTTCGGGATGGAAATGATGCACATGCCTCTAAGGTGATGGGTAGCACAAATGGCAAAGGATCCCAAATAAGAAGATCCTTGAGAACAATTGGGAAACTGATCAATGGCCCTGATAAGAGGAGCCAACATGTTGAAGTGAAGTCACCCATGAAGGGTACTAGCCATAGAAATCATGTAAAATCACCCATCAGGGGCACTGGCTATACGAATAATGTAAAATCACCAATTTCAGCTGTTGACAAAACGAATAGGAGAAAATCTCTAACTGGGATTCAAGCACCACTGCCAAGCAACTCACGTAGATCTTCACTTGGAGGAAAGCCAGTAGCAGCATATGATGACAAGGAGACAAATGCTAGAACTCCTCCAAATCCTCATTCAGACACCAAGACTTCAAAACGGTGGCTGTAA 3036 0.414 MEGGTIDKTRDFNMASRKAEEAACRRYKATQWLESLVGPLGISSQPTERELISCLKNGLILCNAINKIHPGAVPKVVVVDNQMTSQPLTWDSQPLPAYQYFVNLRNFLAAMEELNLPAFEASDLERDTLEMGSAAKVVDCILALKSFQELKQMNNQNGYNKYIKSPLPMRMHSRPAAAPPSDACRHLDLSTTMEKIPPSESNFSNREEIVELLAKQLVDRMLDAKENIDGNIIASLRKEHLVEDPIKVFNQIMACCNGEQPPTRLREDFDKEQGLSLHSTSTQSDVLSAPDNSKRCQTCPGKCKCSQEHLLNMQEKELVDLKALKLKIKKEFEEMQSQFQGFFYDIGSQIQEMSTKAIGYHRVVEENRKLYNMVQDLKGNIRVYCRIRPSFRAESRNIVDFIGEDGSLFILDPSKTLRDGRKLFQFNRVFGPTAGQDEVYKDTQPLIRSVMDGYNVCIFAYGQTGSGKTHTMSGPSGGTFKDMGINYLALNDLFQMSNERNDIITYDIYVQMVEIYNEQVRDLLAEDKTDNKLEIRSCNDDGMSLPDAKLRPVKSTNDVMTLMKLGEVNRAVSSTAMNNRSSRSHSVLTVHVHGKDTSGSSIRSCLHLVDLAGSERVDKSEVTGERLKEAQFINKSLSCLGDVITALAQKNSHIPYRNSKLTLLLQDSLGGHAKTLMFAHVSPEADSFGETVSTLKFAQRVSTVELGAARLNKESSEVMQLKEQVENLKIALATKDAQRMFQRNREPHTPSEKTPLPSRRLSIENCSAIQTDKSVSREDRSGAKSPLLLPRSRRLSLEGPKTIKKDGLQYEPVSMQKYRPMQDVEAVSKLNGQFSSGNAKTPRSPTSISYQTRLIKLNDGMQVHPIKLPQTPEPSVRDGNDAHASKVMGSTNGKGSQIRRSLRTIGKLINGPDKRSQHVEVKSPMKGTSHRNHVKSPIRGTGYTNNVKSPISAVDKTNRRKSLTGIQAPLPSNSRRSSLGGKPVAAYDDKETNARTPPNPHSDTKTSKRWL 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01711 1011 SMART ch_5 25 147 IPR001715 GO:0005515
Viun1g01711 1011 PANTHER KINESIN-LIKE PROTEIN KLP-3 30 874 IPR027640 GO:0003777|GO:0007018
Viun1g01711 1011 FunFam Kinesin-like protein KIN-14A 322 706 - -
Viun1g01711 1011 PRINTS Kinesin heavy chain signature 575 592 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g01711 1011 PRINTS Kinesin heavy chain signature 654 675 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g01711 1011 PRINTS Kinesin heavy chain signature 453 474 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g01711 1011 PRINTS Kinesin heavy chain signature 605 623 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g01711 1011 FunFam Kinesin-like protein KIN-14L 11 175 - -
Viun1g01711 1011 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 342 703 IPR027417 -
Viun1g01711 1011 MobiDBLite consensus disorder prediction 755 772 - -
Viun1g01711 1011 Coils Coil 708 738 - -
Viun1g01711 1011 CDD CH_AtKIN14-like 25 146 - -
Viun1g01711 1011 ProSiteProfiles Kinesin motor domain profile. 380 704 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g01711 1011 SMART kinesin_4 378 712 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g01711 1011 Pfam Calponin homology (CH) domain 24 146 IPR001715 GO:0005515
Viun1g01711 1011 ProSiteProfiles Calponin homology (CH) domain profile. 23 149 IPR001715 GO:0005515
Viun1g01711 1011 Coils Coil 311 338 - -
Viun1g01711 1011 Gene3D Kinesin motor domain 322 706 IPR036961 -
Viun1g01711 1011 Gene3D - 8 165 IPR036872 -
Viun1g01711 1011 MobiDBLite consensus disorder prediction 914 1011 - -
Viun1g01711 1011 MobiDBLite consensus disorder prediction 741 795 - -
Viun1g01711 1011 Pfam Kinesin motor domain 386 703 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Viun1g01711 1011 SUPERFAMILY Calponin-homology domain, CH-domain 19 158 IPR036872 -
Viun1g01711 1011 MobiDBLite consensus disorder prediction 934 979 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01711 Viun-Chr1 28884151 28891737 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01711 310 704 Calmodulin-binding Proteins AT5G65930 40.648 6.18e-72 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01711 K10406 - gmx:100786642 1634.39