Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01697 ATGGCCGAATCATTTCTCTTCAGCATCGCAGAGTCACTCATAGCAAAGCTTGCTTCTCGTGCCTTTGAAGAAGCTTCTCGAGTGGTGGGTTTATATGACGATCTTCGAGACCTTACAAACACTCTCTCTTTAGTCAAGGATGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATGAGCTCCGCCAATGGCTCACTCAACTCAAAACCGCCTTTTCCGATGCCGAAGATGTTTTGGATGAATTTGAGTGTCAAACACTGCAAAAGAAAGTGGTCAAAGCTCATGGTAGTAGGAAAGACAAGGTAAGTCACTTCTTCTCAACTTCTAATCCACTTGTTTTTCGTTACAAAATGGCTCAACAAATTCAACGTATCAGCACCAGACTAGACAACGTTGCAACTAATAGGAATAAGTTTACTCTTGAAAGAATTGAGGTTGACACACGTGTTGTTCATCGGAGAGATATGACACACTCCCGTGTGAGTGATTCAAATGTGATAGGAAGGAAAGACGATAAAGAAAAGGTCATAGAGCTTTTGATGCAGCAGAATCCTAATGATGATGATACAAGTCTCTCTGTTATCCCCATTGTGGGGATTGGAGGCTTAGGAAAGACTACGCTTGCGAAGTTTGTGTTCAATGACAACAGGGTCCAGGAATACTTCCCCTTAAAGATGTGGGTGTGTGTTTCTGATGACTTTGACATTAAACAAAAGATTATAAAAATCATCAATTCTGCCAATGATTCAATATCTGATGATGCTCCTTCTCACCAACCGAATTGGAACATGGTGGATCTGGAACAACTGCAAAATCAACTCAAAAACAAACTTTCCGGTCAAAAGTTCTTACTCGTATTGGACGATGTATGGAACGAAGACCGTGTTAAATGGGTTGAGTTGCGGGATTTAATCCAAGTAAGTGCAGCAGGAAGTAAAATTCTTGTGACTACACGTAATCCTTCAATTGCTGCCATGATGGGCACTGTTCCCTTTCACCTTTTAAAAGGTCTTTCTGATGAAGATTTGTTGTCTCTCTTAGTCAAATGGGCATTTAAAGAAGGAGAAGAGGAAAAACATCCTCACTTAGTAAATATTGGGAGAGAAATAGTGAAAAAATGCGGAGGGGTTCCTTTGGCAGTGAGAACATTAGGGAGTTTACTATTCTCAAAATTTGAGGCTAGTGAATGGGAATACGTGAGAGACAATGAAGTTTGGAATTTGTCTCAGAAGAAGGATGACATTTTACCTGCCCTTAAATTGAGTTATGATCTTATGCCGTCCTATTTGAGGCAATGTTTTGCATTGCTTTCCCTTTACCCAAAGGATTATTTATATAATAGTTATGAAATAAGTTGGCTTTGGGGGGCACTTGGACTCATTGCACTACCAAAAACGAATAGAACACGTGAAGATATGGCCAATCAATATTTGCATGAACTTATGTCAAGATCCTTTCTTCAAGATTTTGAAAACTATGGCACTATGTACGGTTTCCGAATACATGATTTGGTGCATGATCTCGCCCTATTTGTTGCAATGGATGATTGCCTACACGTGAATTCCAACATTCAAAATATTCCCGATAAGGCTCGACATCTGTCTTTTGTTGAAAGCAGTTTGTTCAGCAATTTAGTCACCAAAAAATCAGCAGCTGTGAGAACCGTATTGTTTCCAAATGGTGTATCAACTGCCAACTGTGAATCTATACTTAAGACGTGTATGACAAAGTTCAAATGCTTGCGAGTTTTGGATTTAACTGGTGCGACATTTGAGACTTTGCCTCGTAACATTGCCAAGTTGAGACATTTGAGATATCTGAACATTAGCGAAAATCCCAACATTAAGAGACTCCCCGAATCTATTTGCAAGCTCCAAAGTTTGCAAGCGTTGATGCTTGACGGATGCATGGAGCTGGAAGCATTGCCCAAAGGATTAAGAAAACTGATCAGTCTCCGGGATTTTTCGTTTTCCACAAAGCAAACTGTTTTCCCTGTGAATGAGATCGCCAAATTAAGGTCGCTTGAATTCTTGATTGTTGAATCATGCCATAATGTGGAGTCAATCTTTGGAGGGGTGAAATTCCCTACTCTTAAGACTTTGTTCGTTTCAAACTGTCAGAGTCTGAAGTCTTTGCGGTTGGATGATCAAAATTTTCCTGAATTAGAAACATTGGTGGTTGACAATTGCAACAATTTGGACTTGGAAATGTGGAATGGTCACAATGAAGAAGAAAGTTCCAAGATGAAGTTAAAACTTGTTGCCTTTTCTGGTTTATCACAGCTGGTGACCTGGCCTAAATGGCTTCAGGAAGCTGCTAACTCTTTACAGAGCTTGCTTGTTTTAAATTGTCCCAATATCAAAACACTTCCAGACTGGCTGCCAACTCTGACTAATCTTAAAGCACTTACTATAAGAAATTGTCCAAAGTTGGTATCTCTCCCGGATAATATGCATCACCTCTCCGCACTTGAAAATTTAAGGATCGAAGGTTGTGCCGACTTATGTAAAAAATATGAGTCCTATATCGGAGAGTTTTGGCCCAAAATATCACACATCAAAAACATATACATCAATGGACCAGAAGCCTAA 2595 0.3992 MAESFLFSIAESLIAKLASRAFEEASRVVGLYDDLRDLTNTLSLVKDVLLDAQQKQEHNHELRQWLTQLKTAFSDAEDVLDEFECQTLQKKVVKAHGSRKDKVSHFFSTSNPLVFRYKMAQQIQRISTRLDNVATNRNKFTLERIEVDTRVVHRRDMTHSRVSDSNVIGRKDDKEKVIELLMQQNPNDDDTSLSVIPIVGIGGLGKTTLAKFVFNDNRVQEYFPLKMWVCVSDDFDIKQKIIKIINSANDSISDDAPSHQPNWNMVDLEQLQNQLKNKLSGQKFLLVLDDVWNEDRVKWVELRDLIQVSAAGSKILVTTRNPSIAAMMGTVPFHLLKGLSDEDLLSLLVKWAFKEGEEEKHPHLVNIGREIVKKCGGVPLAVRTLGSLLFSKFEASEWEYVRDNEVWNLSQKKDDILPALKLSYDLMPSYLRQCFALLSLYPKDYLYNSYEISWLWGALGLIALPKTNRTREDMANQYLHELMSRSFLQDFENYGTMYGFRIHDLVHDLALFVAMDDCLHVNSNIQNIPDKARHLSFVESSLFSNLVTKKSAAVRTVLFPNGVSTANCESILKTCMTKFKCLRVLDLTGATFETLPRNIAKLRHLRYLNISENPNIKRLPESICKLQSLQALMLDGCMELEALPKGLRKLISLRDFSFSTKQTVFPVNEIAKLRSLEFLIVESCHNVESIFGGVKFPTLKTLFVSNCQSLKSLRLDDQNFPELETLVVDNCNNLDLEMWNGHNEEESSKMKLKLVAFSGLSQLVTWPKWLQEAANSLQSLLVLNCPNIKTLPDWLPTLTNLKALTIRNCPKLVSLPDNMHHLSALENLRIEGCADLCKKYESYIGEFWPKISHIKNIYINGPEA 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01697 864 Gene3D Ribonuclease Inhibitor 747 847 IPR032675 -
Viun1g01697 864 Gene3D Ribonuclease Inhibitor 520 743 IPR032675 -
Viun1g01697 864 PRINTS Disease resistance protein signature 195 210 - -
Viun1g01697 864 PRINTS Disease resistance protein signature 375 389 - -
Viun1g01697 864 PRINTS Disease resistance protein signature 694 710 - -
Viun1g01697 864 PRINTS Disease resistance protein signature 278 292 - -
Viun1g01697 864 Pfam Rx N-terminal domain 11 98 IPR041118 -
Viun1g01697 864 PANTHER DISEASE RESISTANCE PROTEIN RP 62 830 IPR044974 GO:0006952
Viun1g01697 864 FunFam Probable disease resistance protein At1g61300 149 331 - -
Viun1g01697 864 Pfam NB-ARC domain 171 425 IPR002182 GO:0043531
Viun1g01697 864 Gene3D - 10 124 - -
Viun1g01697 864 SUPERFAMILY L domain-like 501 849 - -
Viun1g01697 864 Gene3D - 338 422 IPR042197 -
Viun1g01697 864 Gene3D - 423 511 IPR036388 -
Viun1g01697 864 Pfam Leucine rich repeat 582 637 IPR001611 GO:0005515
Viun1g01697 864 Coils Coil 66 86 - -
Viun1g01697 864 Gene3D - 149 331 IPR027417 -
Viun1g01697 864 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 438 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01697 Viun-Chr1 28747812 28750750 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01697 178 861 WRKY Transcription Factor Family AT5G45050 22.095 1.03e-08 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01697 - - pvu:PHAVU_001G133600g 1195.26