Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01694 ATGGCCGAATCATTTCTCTTCAGCATCGCAGAGTCACTCATAGCAAAGCTTGCTTCTCGTGCTTTTGAAGAAGCTTCTCGAGTGGTCGGTTTATACGATGATCTTCAAGATCTTACAAACACTCTCTCTTTAGTTAAGGCTGTGCTGTTAGATGCTCAGCAAAAGCAGGAGCACAACCATCAGCTCCGCCAATGGCTCACTCAACTCAAAACTGTCTTCTCCGATGCCGAAGATCTTTTGGATGAATTTGAGTGTCAAACACTGCGAAAAAAAGTGGTCAAAGCTCATGGTAGTACGAAAGACAAGGTAAGTCACTTCTTCTCAAGTTCTAATCCACTTGTTTTTCGTTACCAAATGGCTCAACGAATTAAAGATATCAGCAACAGATTAGACAAGGTTGCAACTAATAGGAATAAGTTTACTCTTGAAAGAATTGAGGTTGATACACGTGTTGTTCATCGGAGAGATATGACACACTCCCGTGTGAGTGATTCTGATGTGATAGGAAGGAAACACGATAAAGAAAAGATCATAGAGCTTTTGATGCAGCAGAATCCTAATGATGATGATATAAGTCTCTCTGTTATCCCCATTGTGGGGATTGGAGGCTTAGGAAAGACTACGCTCGCGAAGTTTGTGTTCAATGACAGCAGGATCCAGGAGTGCTTTCCGTTGAAGATGTGGGTGTGTGTTTCTGACGACTTTGACATTAAACAACTGATTATCAAAATTATCAATTCTGCCAATGATTCTATATCTGATGATGCTCCTTCTCACCAACCGAATTGGAACACGTTGGATCTGGAACAACTGCAAAATCAACTCAAAAACAAACTTTCCGGTCAAAAGTTCTTACTCGTATTGGATGATGTATGGAACGAAGATCGTGTTAAATGGGTTGAGTTGCGGAATTTAATCCAAGTAAGTGCAGCAGGAAGTAAAATCATTGTGACTACACGAAGTAATTCAATTGCTTCCATGATGGGCACAATTCCCCCTCATATTTTAGGAGGTCTTTCGGAAGGGGATTCATTGTCTCTGTTAGTCAAATGGGCATTTAAAGAAGGTGAAGAGGAAAAACATCCTCACTTAGTTGATATTATTGGGAGAGAAATTGTGAGAAAATGCGGAGGGGTTCCTTTGGCAGTGAGAACATTAGGGAGTTTACTATTCTCAAAATTTGAAGCCAGTGAATGGGAATATGTGAGAGACAATGAAGTTTGGAATTTGCCTCAGAAAAAGGATGACATTTTACCTGCCCTTAAATTGAGTTATGATCTCATGCCGTCCTATTTGAGGCAATGTTTTGCATTGTTTTCCCTTTATCCAAAGGATCATCTATTCATAAGTGATGAAATAACTTGTCTTTGGGGGGCACTTGGACTCATTGCACTACCAAAAACGAATAGAACACGTGAAGATGTGGGCAATCAATATTTGCATGAACTTCTGTCAAGATCCTTTCTTCAAGATTTTCAAAACTATGGCACTATGTACGGTTTCAGAATACATGATTTGGTGCATGATCTTGCCCTATTTGTTGCTAAAGATGAGTGTCTACATATGAATTCCAATGTTCAAAATATTTCTGATAATGTTAGACATTTGTCTTTTGCCGAAAGTAGTTTGTTTAGCAATTTAGTCACCAAAAAATCAGCAGCTGTGAGAACCATACTGTTTCCAAATGGTGTAGCAGCTGCCAACTCTGAAGCTATACTAAAGACGTGTTTGGAGAAGTTCAAATGCTTGCGAGTTTTGGTTTTAAGTGGTGCAACATTTGAGACTTTGCCTCGTAACATTGCCAAGTTGAGACATTTGAGATATCTAGACATTAGCGAAAATCCCAACATTAAGAGACTCCCCGACTCTATTTGCAAGCTCCAAAGTTTGCAAGTGTTGTTAGTCAACGGATGCATGGAGCTGGAAGTATTGCCCAACGGATTAAGAAAACTGATCAGTCTCCAGGATTTTTCGTTTTCCACAAAGCAAACTGTTTTCCCTGTGAATGAGATCGCCAAATTAAGGTCGCTTGAATTCTTGATTGTTGAATCATGCCATAATGTGGAGTCCATCTTTGGAGGGGTGAAATTCCCTGCTCTTAAGACTTTGTGCGTTTCAGACTGTCAGAGTCTGAAGTCTTTGTGGTTGGATGGTCAAAATTTTCCTAAATTAGAAACATTGTTTGTTGACAACTGCATCAATCTGGACTTGGAACTGTGGAATGGTCACGATGAAGAAGAAAGTGCAAAACTGAAGTTAAAACTGGTTGGCTTTTATGGTTTATCACAGCTGGTGGCCTTGCCTAGATGGCTTCAGGAAGTTGCCAACTCTTTACAGAGCTTGCTTGTTTTAAATTGTCCTAATATCGAAACACTTCCAGACTGGTTGCCAACTCTGACTAATCTTAAAGCACTTACTATAAGGAATTGTCCAAAGTTGGTATCTCTCCCAGATAGTATACGTCACCTCTCCACACTTGAAAATTTAAGGATTGAAGATTGTGCTGACTTATCTGAAAAATATGAGCTCCATGTTGGAGAATTTTGGCCAAACATATCACACATAAAAAATGTATTCATTGATGAACCAGAAGCCTAA 2598 0.3957 MAESFLFSIAESLIAKLASRAFEEASRVVGLYDDLQDLTNTLSLVKAVLLDAQQKQEHNHQLRQWLTQLKTVFSDAEDLLDEFECQTLRKKVVKAHGSTKDKVSHFFSSSNPLVFRYQMAQRIKDISNRLDKVATNRNKFTLERIEVDTRVVHRRDMTHSRVSDSDVIGRKHDKEKIIELLMQQNPNDDDISLSVIPIVGIGGLGKTTLAKFVFNDSRIQECFPLKMWVCVSDDFDIKQLIIKIINSANDSISDDAPSHQPNWNTLDLEQLQNQLKNKLSGQKFLLVLDDVWNEDRVKWVELRNLIQVSAAGSKIIVTTRSNSIASMMGTIPPHILGGLSEGDSLSLLVKWAFKEGEEEKHPHLVDIIGREIVRKCGGVPLAVRTLGSLLFSKFEASEWEYVRDNEVWNLPQKKDDILPALKLSYDLMPSYLRQCFALFSLYPKDHLFISDEITCLWGALGLIALPKTNRTREDVGNQYLHELLSRSFLQDFQNYGTMYGFRIHDLVHDLALFVAKDECLHMNSNVQNISDNVRHLSFAESSLFSNLVTKKSAAVRTILFPNGVAAANSEAILKTCLEKFKCLRVLVLSGATFETLPRNIAKLRHLRYLDISENPNIKRLPDSICKLQSLQVLLVNGCMELEVLPNGLRKLISLQDFSFSTKQTVFPVNEIAKLRSLEFLIVESCHNVESIFGGVKFPALKTLCVSDCQSLKSLWLDGQNFPKLETLFVDNCINLDLELWNGHDEEESAKLKLKLVGFYGLSQLVALPRWLQEVANSLQSLLVLNCPNIETLPDWLPTLTNLKALTIRNCPKLVSLPDSIRHLSTLENLRIEDCADLSEKYELHVGEFWPNISHIKNVFIDEPEA 865
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01694 865 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 438 IPR027417 -
Viun1g01694 865 Gene3D - 10 124 - -
Viun1g01694 865 Gene3D - 338 423 IPR042197 -
Viun1g01694 865 PANTHER DISEASE RESISTANCE PROTEIN RP 62 834 IPR044974 GO:0006952
Viun1g01694 865 Gene3D - 424 512 IPR036388 -
Viun1g01694 865 PRINTS Disease resistance protein signature 601 617 - -
Viun1g01694 865 PRINTS Disease resistance protein signature 195 210 - -
Viun1g01694 865 PRINTS Disease resistance protein signature 376 390 - -
Viun1g01694 865 PRINTS Disease resistance protein signature 278 292 - -
Viun1g01694 865 Pfam NB-ARC domain 171 426 IPR002182 GO:0043531
Viun1g01694 865 FunFam Probable disease resistance protein At1g61300 149 332 - -
Viun1g01694 865 Gene3D Ribonuclease Inhibitor 561 745 IPR032675 -
Viun1g01694 865 Gene3D Ribonuclease Inhibitor 750 847 IPR032675 -
Viun1g01694 865 SUPERFAMILY L domain-like 502 854 - -
Viun1g01694 865 Pfam Rx N-terminal domain 11 98 IPR041118 -
Viun1g01694 865 Gene3D - 149 331 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01694 Viun-Chr1 28672145 28675066 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01694 583 687 WRKY Transcription Factor Family AT4G12020 31.132 2.05e-06 50.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01694 - - pvu:PHAVU_001G133600g 1213.75