Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01664 ATGGCGCCAAAACGAAAACCTTCTTCTCCAATCTCCATCGGTAACTGCGAGGTTACTGTCGAGGCCACTCGTTTCACCTGTAACTCCGACTCAAACGTCGTCGTAATCTCGCTTCCCCGAAGTGGAAAGGTCAAAGTGTCAGCCGCAGTTGTTGAAAACCGTGAAAACGCTTATGAGGATTTTATAACCGGTGATAAAGAGCATGAGTTCGTGCTGGTTAATCCTAAGGATGCTGATTCTGTTAGTAAATCCTACCTTCAGGAAGTATTACAATTGTACAGGACTGAGCTACCTGGAATGAATTATGCCGCAAATACCGGAAAACAATCCAAGTTTCTTGAGAGATGTGTGACTAATGGGAAATATCGAACCCTACTGGTAAAGTCCACTCGTGTTGCAAATTCAGGAAAGGTTATAGCCGCAATTACATACCAAATCATCCCTGCAGATACAGAATTTGCAGAGGTCCCACTTGCAGCTGTCAATGCAATCCATCAACGAAAGGGTTTTGGTCATTTATTGGTTCTGGAGCTACGGAAAAGACTTCAAAGTGTTGGCATCCGTTCTATTTTATGCTGGGGAGACAAGGAATCAGAAGGGTTTTGGCTTAAACAGGGTTTTGTAGAAATAGCACAGGTGGATACCAAAGGAAGGGCCCGCAGGTTACCTGTAAAATCTGATATTCAGAAATCATTATGCTTTCCTGGTGGTTCAACTCTCATGGTTTGCAACGTAATGAAAGAATGCTTAGCCGATGACGCTAACACTACAAAGTGTCTCCCTTCACAGTTTCATCAGAATTCCTTTACACCTGCCATTGCTGAAGATGAGCAGCTGAAGTTTTCGGGATCGGACAGTCATAATCCTAAGAAAGGCTGTAGTAGCATTGCTCCATTTGCCCAAGTAAACGACGATAGACAGTCCACTGGTGCAGAAAGTTCACAGGATGGAATTGGTGCTAATGTGAATTATTGTTCTCAATCTACAAAAGGTGCAAAGAGGACCTGGGAAGCCTCTTTATCTTCATTGAAGTCAAAAAGAGTGAAGGGGGGCCAGCTGGTTGGCTATCAATCAGGTTCTAGCTGCGGTTTTATCTTAGAGACTGATGAGGCCAATTCCTGTTTTGTAGAGGCCCTTCACGATCCTTCGATTATAGATGGTTCTGAAAAATGTGTCGAGAATTGTTTACATTTAGAAGCTCCTATCAACATAGAACCGCCATCTACTAAACAATGCTTTAGAATTATGTTGATGAATATTGCTGATGATGCTAAGAAAACACAGCTCACAAAGGTGATTGAAGACCTTGGTGGAACTGTATCCACTTGTGGAAGTATGACCACACACGTTGTCACAGGACAAGTGAGAAAAACTCTGAATTTCTGTACCGCCCTTTGTTCAGGTGCTTGGGTGGTCTCATCAAGTTGGTTAAAAGAAAGTTTTCGGGAAGGCAGATTTGTTGATGAACTGCCTCACATACTGAACGATCCGGATTATTCGCTGAAGTACAAATGCGATTTAAAGAGTGCAGTTTTACGGGCAAAAGCTAGCTCTCATACACTGTTCAAGGGATATAATATATGTATTGCAGCTCATGTTCAAACTCCCGCTAAAATATTGTCTGCAATTGTCATGTCCGCAGGTGGTAATGTGATTAGTAGAGTGGAGAAAGTAAAAGAAACATCAACAACAATCTTTGTGACAGGCGAGGAAGATACGGAAGAAGCAATGATAGCTGCAAAGAAAGGGATCCGGACTTTCAGTTGCGATTGGTTTATGAACTGTGTCATGAGACAAGAACTTGACTTGGAAGCCCCCCAGTTTGCTGAATCCTTATAA 1839 0.4263 MAPKRKPSSPISIGNCEVTVEATRFTCNSDSNVVVISLPRSGKVKVSAAVVENRENAYEDFITGDKEHEFVLVNPKDADSVSKSYLQEVLQLYRTELPGMNYAANTGKQSKFLERCVTNGKYRTLLVKSTRVANSGKVIAAITYQIIPADTEFAEVPLAAVNAIHQRKGFGHLLVLELRKRLQSVGIRSILCWGDKESEGFWLKQGFVEIAQVDTKGRARRLPVKSDIQKSLCFPGGSTLMVCNVMKECLADDANTTKCLPSQFHQNSFTPAIAEDEQLKFSGSDSHNPKKGCSSIAPFAQVNDDRQSTGAESSQDGIGANVNYCSQSTKGAKRTWEASLSSLKSKRVKGGQLVGYQSGSSCGFILETDEANSCFVEALHDPSIIDGSEKCVENCLHLEAPINIEPPSTKQCFRIMLMNIADDAKKTQLTKVIEDLGGTVSTCGSMTTHVVTGQVRKTLNFCTALCSGAWVVSSSWLKESFREGRFVDELPHILNDPDYSLKYKCDLKSAVLRAKASSHTLFKGYNICIAAHVQTPAKILSAIVMSAGGNVISRVEKVKETSTTIFVTGEEDTEEAMIAAKKGIRTFSCDWFMNCVMRQELDLEAPQFAESL 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01664 612 Gene3D - 66 223 - -
Viun1g01664 612 Pfam Acetyltransferase (GNAT) family 132 207 IPR000182 GO:0016747
Viun1g01664 612 Gene3D BRCT domain 519 611 IPR036420 -
Viun1g01664 612 CDD BRCT_PAXIP1_rpt6_like 521 602 - -
Viun1g01664 612 SMART BRCT_7 405 484 IPR001357 -
Viun1g01664 612 SMART BRCT_7 519 599 IPR001357 -
Viun1g01664 612 Pfam BRCA1 C Terminus (BRCT) domain 421 481 IPR001357 -
Viun1g01664 612 Pfam BRCA1 C Terminus (BRCT) domain 519 596 IPR001357 -
Viun1g01664 612 CDD NAT_SF 132 193 - -
Viun1g01664 612 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 65 230 - -
Viun1g01664 612 SUPERFAMILY BRCT domain 414 497 IPR036420 -
Viun1g01664 612 ProSiteProfiles BRCT domain profile. 517 601 IPR001357 -
Viun1g01664 612 ProSiteProfiles BRCT domain profile. 415 494 IPR001357 -
Viun1g01664 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 83 214 IPR016181 -
Viun1g01664 612 SUPERFAMILY BRCT domain 517 602 IPR036420 -
Viun1g01664 612 Gene3D BRCT domain 404 518 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01664 Viun-Chr1 28395747 28401777 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun1g01664 BRCT 7.6e-05 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01664 - - gmx:100806087 979.163