Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01662 ATGGCGCCAAAACGAAAACCTTCTTCTCCAATCTCCATCGGTAACTGCGAGGTTACTGTCGAGGCCACTCGTTTCACCTGTAACTCCGACTCAAACGTCGTCGTAATCTCGCTTCCCCGAAGTGGAAAGGTCAAAGTGTCAGCCGCAGTTGTTGAAAACCGTGAAAACGCTTATGAGGATTTTATAACCGGTGATAAAGAGCATGAGTTCGTGCTGGTTAATCCTAAGGATGCTGATTCTGTTAGTAAATCCTACCTTCAGGAAGTATTACAATTGTACAGGACTGAGCTACCTGGAATGAATTATGCCGCAAATACCGGAAAACAATCCAAGTTTCTTGAGAGATGTGTGACTAATGGCAGGAAATATCGAACCCTACTGGTAAAGTCCACTCGTGTTGCAAATTCAGGAAAGGTTATAGCCGCAATTACATACCAAATCATCCCTGCAGATACAGAATTTGCAGAGGTCCCACTTGCAGCTGTCAATGCAATCCATCAACGAAAGGGTTTTGGTCATTTATTGGTTCTGGAGCTACGGAAAAGACTTCAAAGTGTTGGCATCCGTTCTATTTTATGCTGGGGAGACAAGGAATCAGAAGGGTTTTGGCTTAAACAGGGTTTTGTAGAAATAGCACAGGTGGATACCAAAGGAAGGGCCCGCAGGTTACCTGTAAAATCTGATATTCAGAAATCATTATGCTTTCCTGGTGGTTCAACTCTCATGGTTTGCAACGTAATGAAAGAATGCTTAGCCGATGACGCTAACACTACAAAGTGTCTCCCTTCACAGTTTCATCAGAATTCCTTTACACCTGCCATTGCTGAAGATGAGCAGCTGAAGTTTTCGGGATCGGACAGTCATAATCCTAAGAAAGGCTGTAGTAGCATTGCTCCATTTGCCCAAGTAAACGACGATAGACAGTCCACTGGTGCAGAAAGTTCACAGGATGGAATTGGTGCTAATGTGAATTATTGTTCTCAATCTACAAAAGGTGCAAAGAGGACCTGGGAAGCCTCTTTATCTTCATTGAAGTCAAAAAGAGTGAAGGGGGGCCAGCTGGTTGGCTATCAATCAGGTTCTAGCTGCGGTTTTATCTTAGAGACTGATGAGGCCAATTCCTGTTTTGTAGAGGCCCTTCACGATCCTTCGATTATAGATGGTTCTGAAAAATGTGTCGAGAATTGTTTACATTTAGAAGCTCCTATCAACATAGAACCGCCATCTACTAAACAATGCTTTAGAATTATGTTGATGAATATTGCTGATGATGCTAAGAAAACACAGCTCACAAAGGTGATTGAAGACCTTGGTGGAACTGTATCCACTTGTGGAAGTATGACCACACACGTTGTCACAGGACAAGTGAGAAAAACTCTGAATTTCTGTACCGCCCTTTGTTCAGGTGCTTGGGTGGTCTCATCAAGTTGGTTAAAAGAAAGTTTTCGGGAAGGCAGATTTGTTGATGAACTGCCTCACATACTGAACGATCCGGATTATTCGCTGAAGTACAAATGCGATTTAAAGAGTGCAGTTTTACGGGCAAAAGCTAGCTCTCATACACTGTTCAAGGGATATAATATATGTATTGCAGCTCATGTTCAAACTCCCGCTAAAATATTGTCTGCAATTGTCATGTCCGCAGGTGGTAATGTGATTAGTAGAGTGGAGAAAGTAAAAGAAACATCAACAACAATCTTTGTGACAGGCGAGGAAGATACGGAAGAAGCAATGATAGCTGCAAAGAAAGGGATCCGGACTTTCAGTTGCGATTGGTTTATGAACTGTGTCATGAGACAAGAACTTGACTTGGAAGCCCCCCAGTTTGCTGAATCCTTATAA 1842 0.4267 MAPKRKPSSPISIGNCEVTVEATRFTCNSDSNVVVISLPRSGKVKVSAAVVENRENAYEDFITGDKEHEFVLVNPKDADSVSKSYLQEVLQLYRTELPGMNYAANTGKQSKFLERCVTNGRKYRTLLVKSTRVANSGKVIAAITYQIIPADTEFAEVPLAAVNAIHQRKGFGHLLVLELRKRLQSVGIRSILCWGDKESEGFWLKQGFVEIAQVDTKGRARRLPVKSDIQKSLCFPGGSTLMVCNVMKECLADDANTTKCLPSQFHQNSFTPAIAEDEQLKFSGSDSHNPKKGCSSIAPFAQVNDDRQSTGAESSQDGIGANVNYCSQSTKGAKRTWEASLSSLKSKRVKGGQLVGYQSGSSCGFILETDEANSCFVEALHDPSIIDGSEKCVENCLHLEAPINIEPPSTKQCFRIMLMNIADDAKKTQLTKVIEDLGGTVSTCGSMTTHVVTGQVRKTLNFCTALCSGAWVVSSSWLKESFREGRFVDELPHILNDPDYSLKYKCDLKSAVLRAKASSHTLFKGYNICIAAHVQTPAKILSAIVMSAGGNVISRVEKVKETSTTIFVTGEEDTEEAMIAAKKGIRTFSCDWFMNCVMRQELDLEAPQFAESL 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01662 613 SMART BRCT_7 406 485 IPR001357 -
Viun1g01662 613 SMART BRCT_7 520 600 IPR001357 -
Viun1g01662 613 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 84 215 IPR016181 -
Viun1g01662 613 CDD BRCT_PAXIP1_rpt6_like 522 603 - -
Viun1g01662 613 SUPERFAMILY BRCT domain 415 498 IPR036420 -
Viun1g01662 613 CDD NAT_SF 133 194 - -
Viun1g01662 613 Gene3D BRCT domain 520 612 IPR036420 -
Viun1g01662 613 Pfam Acetyltransferase (GNAT) family 133 208 IPR000182 GO:0016747
Viun1g01662 613 Gene3D - 66 224 - -
Viun1g01662 613 Pfam BRCA1 C Terminus (BRCT) domain 520 597 IPR001357 -
Viun1g01662 613 Pfam BRCA1 C Terminus (BRCT) domain 422 482 IPR001357 -
Viun1g01662 613 Gene3D BRCT domain 405 519 IPR036420 -
Viun1g01662 613 ProSiteProfiles BRCT domain profile. 416 495 IPR001357 -
Viun1g01662 613 SUPERFAMILY BRCT domain 518 603 IPR036420 -
Viun1g01662 613 ProSiteProfiles BRCT domain profile. 518 602 IPR001357 -
Viun1g01662 613 PANTHER PAX TRANSCRIPTION ACTIVATION DOMAIN INTERACTING PROTEIN 65 232 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01662 Viun-Chr1 28395746 28401777 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Viun1g01662 BRCT 7.6e-05 CL0459
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01662 - - gmx:100806087 974.541