Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01650 ATGAAGGTTGAAATTGAAGGCAGCCAGAGTGACTCTGCAGAATCTCAGGGAGTGTCTGGAACAGATGAATCTGTTTCCAGCCAACCAGAAAATAGAAGACTTGAATCCAAGAAGAAACTAAAGAAAGTGAGGTCAATAAGGCTTGTAAGATTGCCAAGCAAGAGATCATCTGCTAGAGGGAGACCCCAATATGATCATCATCTCTCCATTCTCTCATCAGTTAGCACAGAAAATTTAGAGGGGGTAACACCACCTGATATGGCAGATGCATCACCCCATTACATGAAGGGTACCAGCAGTTCTCACGCAAAGGATAGTGTTCAGAATACACAAAGACTATTGTTCACAAAGAAGACTTTGGGAAGAATGTCTACTTTGAAACTGAAGAGGAGTCTCACCAGAAAGGTAAATGGAAGGACTGAACCAAAGAGAAAACGGAAGTCTTCTAGATCAATCATGCTTGTAACTGTCAAGGGCCAAAAGTCATCTGAATCTATTGCAAGTGATGCTGATAACAAAACCCAGAGAGTCATTACCAGAAGATTAAGCTTGAAGCCTGTGAGGATCTTAGCAAAGATTCCCACTTTCAAATCAAAGAATTCTTCCATGGAGAGTGGCCAATCCCCAGACACAAGCTTGCTTAGAGCCACTTGCTCTTCTGCTCTGAAGGATTCCCATTTTCCTCACCACATTGGCATCCCTCAAGAGGAAAGTGACTCTCAAGGAGTATCAGCTGTTGCCAAGGTTTGTCCATATTCTTATTGCTCACTTCATGGTCACCGCCATGGGAATCTGCCTCCACTGAAGCGCTTTGTGTCAATGAGGAGGCGCACGTTGAAGAACCAGAAGCCAACCAAAATGGATCATCAACCTGTTACTAGATCAGATCAGTTTGGTAATGCAAAGAAAGCTACTCGTAAAACTCAAACTGTCCACTGTGAAGGTGGCAAATCTCATTTTCAGAACAAGAAAAAGCTGGTAAGGGATTCATGTATTAGGCCTCATGACACTCCAGAATCCACAGTTACTGAAAGTGTGAAATCAGTATCGACAGATGGTATTCAGTTTTCTGCTCCTGATATTGAGATGTTGGAGGGAGAAGTAACCAACACAGGAAAAAACATGGAGCCAGACCATGAAGTAGTTGAGGTGAGTTCTGTACCGAAAGAGTCTACACATGCTAGCACTACTGATATGGCATGTGGATTGCAAGAAAGAGATAAAAAGCATATCAACATGTGGCACTTGGTGTACAAGCATGCTGTATTAAGTAACACAGGGAAATCTGAAAACAAGCAGCCCTTTGATGGAAGGGACAAGGAAGGAAGAGATCAAGAATTCCTTGCAACTAATGAAGTAAACAACTCTAATTGTCGCGATGATTGTGATACAGACCATGATATGGATGATGAGAATAAGAATGTAATTGAGCTGGTGCAGAAAGCGTTTGATGAAATTCTTCTCCCAGAACCTGAAGAACTCTTTTCTGATGATAATTCCAAATCTGAAGGCGGTGATTCAGACGAGGTACTCTTAGAAAAAAGGGAAGGCCAGACAGAATGGAAAACCTCAGAATCCACAGAATCTCCAATAGCACAGAGGATGGAGACCAAATCTGATCAAAGAGCACCGAAAAGCTGGAGCAATCTGAAAAAGTTAATCCTCTGGAAAAGGTTTGTAAAGGCATTGGAGAAGGTAAGAAATATCCACCCTCAAAGACCAAGACGTTTTCCTTCTGATTCGAACTTTGAAATGGAAAAAGTTTTTCTCAAGCACCAAACAGCCGAAGAGAAAAAGCATGCTGAGGAATGGATGCTTGACTATGCACTTCAAAAGGTTATTTCTAAACTTGCACCTGCTCAAAGACGAAGAGTGACACTTTTAGTGGAAGCTTTTGAAACAGTTCAGCCATTTCAAGATGTTGAAAATAGTACACGGCTTTCTGCAACAACGGAGCATCAATCAAATCTAATTCAATCCCTTGAGAATTCCTCAAATCAAAGCAAGGAAGAAGCATCACTTTCTCATAACAGTACCATGGAACTGGCTGTTAGTACTGGTGATGATCCAATGATAGAAATGCACAGTCCTACTATGCTTAAAGAAAGATGTGTTGACTATCCTGAGACTGAGACAGTCAATAATATGCCTGTATTTAGAGATATTGAAGAAGACTTGAATGGAAAGCAATGTTTAGCCAGAAGTTATGATAATGAGAAGTTATCAAGTGACAATGCTAATATTTTTGTTGGAGAGATCAAAGATACCAGATCAAGTTCCTTATATAAGCCAACTGAATTTACAAGCAGCCATGTGGAGGATTCAACCAATGCAGTAGTCAATGATGGTTCAGAAGACTTGCTATCCAGTTTGAATACAGAAAATCAACATATCAAATCTGAATCATCTGGAAGAGATGTCGAAACCAAGAATCTGATTGGTGATAATGAGGAAAAGATTTCCATGCCTAAAAATTTATTAGTAGAAGGTCTAGTTAGATCACTCAGATCTAACTTGATTGGTTCAGGAGCACCTGCGAAGCTATCAGATGAATCATCAGCTGATGAAAAAGTTAAGTTGGAAACTGAGACTGTTGAAGAGTTCCCTACAAAGGAACAATCTAAAGCTCCTACGAGTGCTTCTGTAGAACCTGAGACCCCTGTGGAGAAACAGAACAACACAGGATTGTGGTACTTGGTTTATAAACACATGGTATCAAATATGGCTGAAAGCAATTCCAAGTCAGTGATTGATGGTGAAGATGAGCAAGAGTCAGCGTTTGATGAAAGCAGAACACGAGGATCTTCCATATCTTACGAAGGCATACCTGTGAGTGATCAAGAGAAGCAATTCAAGGACCATGCTGTAGCTGATCCAGAAGTTGCACTCCAACAGATTGAAGCCATCAAGATGGTAGAAGAAGCAATTGATTCAATTCTTCCAGATGATCAGGATGACTTAGCAGACAAGGAGTCACTCACTGGCAACACAATATCAGACAACTCCAAACAATCTGACAGAACTGAAGGAGTGTACAGCGAAGGCCTGAACCAAAAAGAAGAAAAGATGGAATCTGGTAATGAAATACTCCAGGAACAGCAAAAAGAATCAGCACCAAAGGAACAAGGCAAAACAAACCAGCCATTGTCTAGAAGCTGGAGCAATCTTAAAAAAGTGATTCTTCTCAGGAGATTCATCAAGTCATTGGAAAAAGTAAGGAAATTCAATCCAAGAGGCCCCAGATATCTACCTCTAGAGCCTGATTCAGAAGCTGAAAAAGTTAACTTAAGGCATCAAGACATGGAAGAAAGAAAAGGAACTGAAGAATGGATGCTTGATTATGCACTTCGACAGGTTGTTTCCAAATTAACCCCCGCTAGGAAAAGAAAAGTGGAGCTGCTGGTGGAAGCTTTTGAAACAGTCATTCCAACCATAAGAAAATGA 3444 0.408 MKVEIEGSQSDSAESQGVSGTDESVSSQPENRRLESKKKLKKVRSIRLVRLPSKRSSARGRPQYDHHLSILSSVSTENLEGVTPPDMADASPHYMKGTSSSHAKDSVQNTQRLLFTKKTLGRMSTLKLKRSLTRKVNGRTEPKRKRKSSRSIMLVTVKGQKSSESIASDADNKTQRVITRRLSLKPVRILAKIPTFKSKNSSMESGQSPDTSLLRATCSSALKDSHFPHHIGIPQEESDSQGVSAVAKVCPYSYCSLHGHRHGNLPPLKRFVSMRRRTLKNQKPTKMDHQPVTRSDQFGNAKKATRKTQTVHCEGGKSHFQNKKKLVRDSCIRPHDTPESTVTESVKSVSTDGIQFSAPDIEMLEGEVTNTGKNMEPDHEVVEVSSVPKESTHASTTDMACGLQERDKKHINMWHLVYKHAVLSNTGKSENKQPFDGRDKEGRDQEFLATNEVNNSNCRDDCDTDHDMDDENKNVIELVQKAFDEILLPEPEELFSDDNSKSEGGDSDEVLLEKREGQTEWKTSESTESPIAQRMETKSDQRAPKSWSNLKKLILWKRFVKALEKVRNIHPQRPRRFPSDSNFEMEKVFLKHQTAEEKKHAEEWMLDYALQKVISKLAPAQRRRVTLLVEAFETVQPFQDVENSTRLSATTEHQSNLIQSLENSSNQSKEEASLSHNSTMELAVSTGDDPMIEMHSPTMLKERCVDYPETETVNNMPVFRDIEEDLNGKQCLARSYDNEKLSSDNANIFVGEIKDTRSSSLYKPTEFTSSHVEDSTNAVVNDGSEDLLSSLNTENQHIKSESSGRDVETKNLIGDNEEKISMPKNLLVEGLVRSLRSNLIGSGAPAKLSDESSADEKVKLETETVEEFPTKEQSKAPTSASVEPETPVEKQNNTGLWYLVYKHMVSNMAESNSKSVIDGEDEQESAFDESRTRGSSISYEGIPVSDQEKQFKDHAVADPEVALQQIEAIKMVEEAIDSILPDDQDDLADKESLTGNTISDNSKQSDRTEGVYSEGLNQKEEKMESGNEILQEQQKESAPKEQGKTNQPLSRSWSNLKKVILLRRFIKSLEKVRKFNPRGPRYLPLEPDSEAEKVNLRHQDMEERKGTEEWMLDYALRQVVSKLTPARKRKVELLVEAFETVIPTIRK 1147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01650 1147 MobiDBLite consensus disorder prediction 130 151 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 1013 1039 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 644 678 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 911 946 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 494 522 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 291 306 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 1 108 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 281 317 - -
Viun1g01650 1147 PANTHER CALMODULIN-BINDING PROTEIN-RELATED 669 1143 IPR044681 GO:0005516
Viun1g01650 1147 SMART CaM_binding_2 523 637 IPR012417 GO:0005516
Viun1g01650 1147 SMART CaM_binding_2 1031 1143 IPR012417 GO:0005516
Viun1g01650 1147 MobiDBLite consensus disorder prediction 94 108 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 523 544 - -
Viun1g01650 1147 Coils Coil 1016 1036 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 850 870 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 871 889 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 489 544 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 982 1049 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 991 1012 - -
Viun1g01650 1147 Pfam Plant calmodulin-binding domain 533 636 IPR012417 GO:0005516
Viun1g01650 1147 Pfam Plant calmodulin-binding domain 1039 1143 IPR012417 GO:0005516
Viun1g01650 1147 MobiDBLite consensus disorder prediction 842 889 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 8 27 - -
Viun1g01650 1147 MobiDBLite consensus disorder prediction 915 929 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01650 Viun-Chr1 28307140 28311741 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01650 468 650 Calmodulin-binding Proteins AT5G04020 37.297 7.70e-23 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01650 - - gmx:100804484 1606.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01650 1 28307140 28311741 Viun1g01650 1 28307140 28311741 ECH