Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01645 ATGACAGAATCAAACGCAATTGCGAATGGATTGGCTGGTGCAGGTGGTGGAATCATTGCTCAAATCATCACTTATCCTCTTCAAACGGTAAACACGCGCCAGCAAACTGAGAGAACACTAAAGAAGAACAAGCAAAGTTTGCCCTCCAACACAACCACTGCTCCTAGCACTCTTCTTCAGATCTTTCAGGTCATTAAAACTGAGGGTTGGGGTGGACTCTACAGTGGCCTCAAGCCTTCTCTTCTTGGAACTGCTGCTTCTCAGGGCATTTACTACTATTTCTATCAAGTTTTCAAGAACAAGGCAGTGGCGATTACAGCTGCTCGGAAGGTGAAAGGGCATGGAGATGGTACTGTTGGGATGTTTGGTTGGCTTGTTGTGGCTGCAATTGCTGGGTCCTTGAATGTGTTGTTTACGAATCCAATATGGGTTTTAGTGACTCGGATGCAGACTCATACTCAAGCAGAAAGGAAAATTATGGATGAAAAGAAAGAAGCTTTAAGGAAGGCTGCTTCTGAGAGCGCCATAGCAGACTCCACATTGCAAGATAAATTGGATGAACTGAATTCTATGAAACCTCGACCATATGGAACTATACATGCAGCTAGAGAAGTGTACAACGAAGCGGGTACAGTAGGATTTTGGAAGGGTGTCTTCCCTGCCCTTATTATGGTATGCAATCCATCAATTCAGTTTATGATTTATGAAAGCTCATTAAAGCATCTAAGGGCAAAACGTGCAGCTAAGAAGCAAGGGAATACAAGTATATCTGCTTTGGAGGTCTTTTTGGTGGGAGCAATAGCTAAGCTTGGAGCCACTGTGACAACATATCCATTACTAGTTGTGAAGTCAAGGCTTCAAGCAAAACAGGAGATTGGTGGCAATAACTCCTTAAGATACTCAGGTACTTTTGATGCTGTACTTAAAATGATCCGTTATGAAGGAATAACTGGCTTCTATAAGGGGATGAGCACAAAGATAGTGCAGAGTGTTTTTGCAGCCTCTGTTCTGTTTATGATCAAAGAGGAGCTTGTTAAGGCTTTTATAGTTCTAACCAATAAGAGCAAAAAGGTTGCATCAAATTTGAGTAGTTGA 1095 0.4228 MTESNAIANGLAGAGGGIIAQIITYPLQTVNTRQQTERTLKKNKQSLPSNTTTAPSTLLQIFQVIKTEGWGGLYSGLKPSLLGTAASQGIYYYFYQVFKNKAVAITAARKVKGHGDGTVGMFGWLVVAAIAGSLNVLFTNPIWVLVTRMQTHTQAERKIMDEKKEALRKAASESAIADSTLQDKLDELNSMKPRPYGTIHAAREVYNEAGTVGFWKGVFPALIMVCNPSIQFMIYESSLKHLRAKRAAKKQGNTSISALEVFLVGAIAKLGATVTTYPLLVVKSRLQAKQEIGGNNSLRYSGTFDAVLKMIRYEGITGFYKGMSTKIVQSVFAASVLFMIKEELVKAFIVLTNKSKKVASNLSS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01645 364 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 5 353 IPR044712 GO:0006862|GO:0055085
Viun1g01645 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 256 347 IPR018108 -
Viun1g01645 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 4 101 IPR018108 -
Viun1g01645 364 Gene3D Mitochondrial carrier domain 11 359 IPR023395 -
Viun1g01645 364 Pfam Mitochondrial carrier protein 119 243 IPR018108 -
Viun1g01645 364 Pfam Mitochondrial carrier protein 256 348 IPR018108 -
Viun1g01645 364 Pfam Mitochondrial carrier protein 5 100 IPR018108 -
Viun1g01645 364 SUPERFAMILY Mitochondrial carrier 6 343 IPR023395 -
Viun1g01645 364 ProSiteProfiles Solute carrier (Solcar) repeat profile. 119 241 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01645 Viun-Chr1 28167002 28171476 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01645 64 348 Chloroplast and Mitochondria Gene Families AT1G25380 27.336 4.12e-27 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01645 K13354 - gmx:100775304 628.632