Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01617 ATGGCACACAACGGAAAAGAGTCCCAGTTTTTGACGAGTGATTTCGATGGGGATAACGAAGAACATAACAGACAATCTGGTGATTACAGCAGGAGTGAGCATAGTAATCAATATGACAGTGACGAGGATGGGAATCGCAAAACGCACCCTGAATCTTCTTTCATTTCTCAACAGTGGCCTCAAACTTATAGAGATGCCATTGATTCTTACACAATATCTGTCGCTCCAAATCTTGAATCAATTATACGAGCACCAAGTGTTATTTATTCAAGCTTTATCGGTGGTGGTTCAAAGAGTATGTTGTTGGAACATGATGAAAAGATCTCTTTTCTATCTGGTGAGGAAGTTCAACCAGGGATATCAAGAAGACAATCAACATGGTGGGAGAAAGCTTCAGTTCAAATGCAAATTCCTGAAGAGTTACCAATTGGTTATGGATGCAGCCTCAGTCAAACAATATTTAACGGGATTAATGTGATGGCTGGAGTTGGCCTTCTTTCTACACCATATACAGTGAAACAAGGTGGATGGGCGAGCATGCTTGTGATGTTTTTCTTTGCAATTGTATGTTGCTATACTGCAGATCTTATGAAACACTGCTTTGAAAGCGAAGAAGGAATCGTTAGCTACCCTGACATAGGAGAAGCTGCATTTGGAAGATATGGTCGCCTTATTGTATCAATCATTTTGTACGTTGAGTTATATTCATATTGTGTGGAGTTTATCATCTTGGAAAGTGATAACCTCACTGGGTTGTTTCCGGGAACATCCTTAGACTGGGGGGGTTTCCACTTGGGCTCCAAACACTTGTTTGGAATCTTAACTGCACTTATTATTCTTCCTACTGTTTGGTTAAAGGATCTACGCGTACTCTCCTATCTCTCAGCTGGAGGGGTTGTGTCTACTAGTTTGGTTATTTTGTGTATTTTTCTTGTGGGGAAAAGAGATGATGTTGGATTCCACCACCACAGTGGTTCATTAGTGAATTGGAGTGGCATTCCTTTTGCTGTTGGTATCTACGGTTTTTGCTTTGCAGGACATTCAGTTTTTCCGAACATTTATCAGTCTATGGCTGACAAAAGAGAATTTACCAAGGCTGTGGTTGTAAGTTTTCTTATATGCACATTTGTATATGGAAGCTCAGCTGTCATGGGATTTCTAATGTTTGGTGAAGGGACTTTGTCTCAGATAACATTGAATTTACCTCGTCATGCATTGGCTTCCAAAGTTGCTCTGTGGACAATAGTAATTAGCCCATTAACCAAATATGCTTTGATGATGAACCCATTGGCAAGGAGCTTTGATGAGTTGCTACCGATTACCGTGTCAAGTAGTTATTGGTGTTTCATTACTCTTAGAACGGTGTTGGTTATATCTACAGTTTGTGCTGCTTTTCTCATTCCATTTTTTGGGCTTGTGATGGCTTTAATAGGTTCTCTCCTCAGTTTGCTAGTGGCAGTGGTGTTGCCATCTTTATGCTTTTTGAAAATTGTGGGAAAAAATGCAACATGTACACAGGTTGTTCTTAGCGTCATAATTGCTGTGCTTGGAATCGCTGCTGCTTTGATCGGAACATACTCATCTGTATCCAAAATTTTGCAAAAATAA 1608 0.4005 MAHNGKESQFLTSDFDGDNEEHNRQSGDYSRSEHSNQYDSDEDGNRKTHPESSFISQQWPQTYRDAIDSYTISVAPNLESIIRAPSVIYSSFIGGGSKSMLLEHDEKISFLSGEEVQPGISRRQSTWWEKASVQMQIPEELPIGYGCSLSQTIFNGINVMAGVGLLSTPYTVKQGGWASMLVMFFFAIVCCYTADLMKHCFESEEGIVSYPDIGEAAFGRYGRLIVSIILYVELYSYCVEFIILESDNLTGLFPGTSLDWGGFHLGSKHLFGILTALIILPTVWLKDLRVLSYLSAGGVVSTSLVILCIFLVGKRDDVGFHHHSGSLVNWSGIPFAVGIYGFCFAGHSVFPNIYQSMADKREFTKAVVVSFLICTFVYGSSAVMGFLMFGEGTLSQITLNLPRHALASKVALWTIVISPLTKYALMMNPLARSFDELLPITVSSSYWCFITLRTVLVISTVCAAFLIPFFGLVMALIGSLLSLLVAVVLPSLCFLKIVGKNATCTQVVLSVIIAVLGIAAALIGTYSSVSKILQK 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01617 535 MobiDBLite consensus disorder prediction 13 49 - -
Viun1g01617 535 FunFam Amino acid transporter AVT1A 145 535 - -
Viun1g01617 535 MobiDBLite consensus disorder prediction 1 58 - -
Viun1g01617 535 PANTHER OS05G0424000 PROTEIN-RELATED 156 516 - -
Viun1g01617 535 Gene3D Amino acid/polyamine transporter I 147 533 - -
Viun1g01617 535 Pfam Transmembrane amino acid transporter protein 148 528 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01617 Viun-Chr1 27886019 27894283 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01617 12 471 Amino Acid or Auxin Permease AAAP Family AT2G41190 58.225 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01617 K15015 - gmx:100790344 693.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01617 1 27886019 27894283 Viun1g01617 1 27886019 27894283 ECH