Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01582 ATGTTTCCCCAGCCATGGATCTTCATACCCGCAATCATCGCAACTTCACTGCTCATGTCCTCACTGGTTAAGCCATTTCCAGAAGCTGATAAGGTGAAACACTTGCCTCAACAGTCACCAGTTTCCTTCCAACAATTTGCTGGCTATGTACCCGTTGATGACAATAATCAAAGAGCTCTTTTTTACTACTTTGTTGAAGCACAAAGCAACCCTTCTTCAAAGCCTCTGGTTCTCTGGCTCAATGGAGGGCCTGGCTGCACATCTGTTGGAATTGGAGCCTTCACCGAACATGGTCCTTTTGTTACAAACCAAGGAGAGGCTCTTCAGAAAAATCAGTATAGTTGGAACAAAGAGGCAAACATTTTGTACCTGGACTCACCAGCAGGTGTTGGATTCTCTTACTCTCTCAATTTGTCGTTTTATAAGACTCTGAACGATGAAGTCACAGCCCGAGACAGTCTAGTTTTCCTGCAGCGTTGGTTTGCCAAGTTCCCAGAATTCAAAAACAGAGACTTTTATATAATGGGAGAGAGTTATGGAGGTCACTATGTACCTCAACTTGCCGAACTCATTATTAAGACTAAATTGAATTTTAACCTAAAGGGCATAGCAATTGGAAACCCTCTTCTAGATTTTGACACTGATATGAATTCAGTTGATGAATATTACTGGTCTCATGGAATCATCACTGATCATGCTTACAAAATCAAGACCTCTATTTGCAACTCGTCCAGATTATTAAGAGAATACTTCACTGGCCGTCAACTTTCCAACGATTGTCTTCTTGCAGCTCAAAAAGTCTCAGAAGAATATTCTTTTACATCTTTCATTGATCCATATTACGTCATTGGCGACAGATGTCTTTCTTACAATGTTTCTCAGGCAGGTTTTCTTAAGGAGATGCTAAGTTCAGGGATGTTTCAGTTTAGGAACTCCCATGATGTGCTTCAAACCCAAGAACCAGACCAGCAAGTTGATGAGTGTATTTTGAAATATTCAGAGAAGTACTTGAACAGAAAAGATGTGCAGAAGGCTCTTCATGCCCGTGTGGTGGGAAGTAACAATTATCGTTTGTGCAGCAAGATTGTACTCGCAAATTATGACCCACTCAACAGAGAGATACCGACAATTAATGTTGTCGGCTTCCTTGTAAAATCAGGCCTTCGAGTCATCGTTTACAGTGGGGACCAAGACTCTGTGATTCCATTCATGGGCACCAGAAGATTAGTTGATAAACTTGCAAAGAAAGCAGGGCTTAAAACCACAGTGCCTTACAGTGCCTGGTTTGTGGACAAACAGGTTGGAGGATGGGCACAAGTTTTTGGGAATCACCTTACCTATGCCATAGTGAGAGGAGCTTCACATGGCACTCCAACTACCCAACCAAAGAGATCTTTTGTTTTATTTGATGCTTTTCTCCATGGGAAACCACTGCCTAGAGCATGA 1446 0.4198 MFPQPWIFIPAIIATSLLMSSLVKPFPEADKVKHLPQQSPVSFQQFAGYVPVDDNNQRALFYYFVEAQSNPSSKPLVLWLNGGPGCTSVGIGAFTEHGPFVTNQGEALQKNQYSWNKEANILYLDSPAGVGFSYSLNLSFYKTLNDEVTARDSLVFLQRWFAKFPEFKNRDFYIMGESYGGHYVPQLAELIIKTKLNFNLKGIAIGNPLLDFDTDMNSVDEYYWSHGIITDHAYKIKTSICNSSRLLREYFTGRQLSNDCLLAAQKVSEEYSFTSFIDPYYVIGDRCLSYNVSQAGFLKEMLSSGMFQFRNSHDVLQTQEPDQQVDECILKYSEKYLNRKDVQKALHARVVGSNNYRLCSKIVLANYDPLNREIPTINVVGFLVKSGLRVIVYSGDQDSVIPFMGTRRLVDKLAKKAGLKTTVPYSAWFVDKQVGGWAQVFGNHLTYAIVRGASHGTPTTQPKRSFVLFDAFLHGKPLPRA 481
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01582 481 Gene3D alpha/beta hydrolase 27 289 IPR029058 -
Viun1g01582 481 Gene3D - 328 363 - -
Viun1g01582 481 SUPERFAMILY alpha/beta-Hydrolases 23 479 IPR029058 -
Viun1g01582 481 ProSitePatterns Serine carboxypeptidases, serine active site. 174 181 IPR018202 GO:0004185
Viun1g01582 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 160 185 IPR001563 GO:0004185|GO:0006508
Viun1g01582 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 124 134 IPR001563 GO:0004185|GO:0006508
Viun1g01582 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 445 458 IPR001563 GO:0004185|GO:0006508
Viun1g01582 481 PRINTS Carboxypeptidase C serine protease (S10) family signature 111 123 IPR001563 GO:0004185|GO:0006508
Viun1g01582 481 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 31 462 IPR001563 GO:0004185|GO:0006508
Viun1g01582 481 Gene3D - 377 475 - -
Viun1g01582 481 Pfam Serine carboxypeptidase 38 475 IPR001563 GO:0004185|GO:0006508
Viun1g01582 481 FunFam Carboxypeptidase 25 479 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Viun1g01582 Viun-Chr1 27501844 27504911 Proximal
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01582 386 478 Calmodulin-binding Proteins AT2G22960 30.108 1.34e-12 64.7
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01582 K16297 - gmx:100819443 855.899
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01582 1 27501844 27504911 Viun1g01582 1 27501844 27504911 ECH