Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01571 ATGCAAAGCTACGTAAGTTTTTCGAATGAGTGGCCTTTTTTTCAATCCATAGGTGAAGCAGTAAAAGGACGGAAACAGCAGTGTGCTGCGAAAGGAAGGAGCCGCAAGGTGTTAGGTGATATTGGGAATTTGGCCAATGTAGAAGAAGTTGAAGTCAAACCTAATCGCCCCATAACAAGGAGTTTTGGAGCTCTGCTACTTGCCAAGGCACAAGCAGCAGCAGCAGCAGCTACTGATAAGAATAACAAGAAACGGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGCAGCGACCAAAAGAGTGGTCCAAAAACGGGGTCAGAAAAAAGGCACTGTGAAACCAAAACCTGAGAAAGCCATCGACAAGGAAGCTATCCCAGATAAGGAGATTCAGAAAGACAAGACAGGGGAAGGAGATGACAACTCTAAGAAGAATTCACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCAAGCGGCATAACTGACAAACCGAAGGAGCACATTATTGACATTGATGCTGATGATGTTGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTGTTGAGAATGAGAACCGCCCTCATGACTACATAGAGTCACAACCTGAGATAAATGAGAGGTCGAGAGCTATACTAGTTAATTGGCTGATCGAAGTCAACACCAAATTTGGCCTTTCACTTGAGACCCTTTACTTGACAATCAATATCATTGATCGATTCCTATCAGTTAAGAGTATTCCAAGGAGTGAGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGGCCCCTGAGGTTGCAAGTCTTGTCTGCCTTACAACTTTCACTCCTGAACAGATACTGCTGATGGAGAAAACCATACTATATCAGCTGGAATGGACTTTGACTGTGCCAACACCTCTTGTTTTCCTGGTTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGATGGAAAACATGACTCATTTTCTGTCTGAGTTGGGATTGGTGAACTATGCCACCATAATGTATTGCCCATCAATGATTTCTGCCTCAGCAGTATTTGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGACACTTAAGTTGCACACTGGTTACTCACAAGAACAACTTATGGAATGTGCTAGATTATTGGTGAGCTTCCACTCCATGGTTGGGGATGAAGAAGAGCTGAAGGTAGTGCACAGAAAGTATTCTGATCCTCAGAAAGGAGCTGTCGCTATGCTCCCACCAGCTAAAAATCTTCTCCCTGAACCACACAGAGTTAACGAAACTGAAGAAGCAGGCAAAAAAACTCCCTTAGTTTTTTCATAA 1398 0.4399 MQSYVSFSNEWPFFQSIGEAVKGRKQQCAAKGRSRKVLGDIGNLANVEEVEVKPNRPITRSFGALLLAKAQAAAAAATDKNNKKRVSANVAGPPPVSNAVAATKRVVQKRGQKKGTVKPKPEKAIDKEAIPDKEIQKDKTGEGDDNSKKNSHAFTSVLTARSKAASGITDKPKEHIIDIDADDVDNELAAVEYIDDLYRFYKLVENENRPHDYIESQPEINERSRAILVNWLIEVNTKFGLSLETLYLTINIIDRFLSVKSIPRSEELQLVGISAMLMASKYEEIWAPEVASLVCLTTFTPEQILLMEKTILYQLEWTLTVPTPLVFLVRFIKATVPDQEMENMTHFLSELGLVNYATIMYCPSMISASAVFAARCTLNKTPLWNETLKLHTGYSQEQLMECARLLVSFHSMVGDEEELKVVHRKYSDPQKGAVAMLPPAKNLLPEPHRVNETEEAGKKTPLVFS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01571 465 MobiDBLite consensus disorder prediction 77 150 - -
Viun1g01571 465 MobiDBLite consensus disorder prediction 115 149 - -
Viun1g01571 465 PIRSF Cyclin_A_B_D_E 12 452 IPR046965 GO:0016538|GO:0044772
Viun1g01571 465 Pfam Cyclin, C-terminal domain 322 439 IPR004367 -
Viun1g01571 465 SMART cyclin_7 230 313 IPR013763 -
Viun1g01571 465 SMART cyclin_7 326 408 IPR013763 -
Viun1g01571 465 SUPERFAMILY Cyclin-like 185 319 IPR036915 -
Viun1g01571 465 Gene3D - 314 446 - -
Viun1g01571 465 Gene3D - 210 313 - -
Viun1g01571 465 FunFam G2/mitotic-specific cyclin-1 310 435 - -
Viun1g01571 465 Pfam Cyclin, N-terminal domain 197 319 IPR006671 -
Viun1g01571 465 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
Viun1g01571 465 CDD CYCLIN_AtCycB-like_rpt2 322 439 - -
Viun1g01571 465 SUPERFAMILY Cyclin-like 321 441 IPR036915 -
Viun1g01571 465 SMART Cyclin_C_2 322 440 IPR004367 -
Viun1g01571 465 PANTHER CYCLINS 148 428 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01571 Viun-Chr1 27337111 27339561 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01571 30 400 Core Cell Cycle Gene Families AT3G11520 52.533 4.60e-122 359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01571 K21777 - gmx:547919 599.742