Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01570 ATGGCATCAAGAACCACCGTAAAACAACAGGGCGCATGTGAAGCAGTAAAAGGACGGAAACAGCAGTGTGCTGCGAAAGGAAGGAGCCGCAAGGTGTTAGGTGATATTGGGAATTTGGCCAATGTAGAAGAAGTTGAAGTCAAACCTAATCGCCCCATAACAAGGAGTTTTGGAGCTCTGCTACTTGCCAAGGCACAAGCAGCAGCAGCAGCAGCTACTGATAAGAATAACAAGAAACGGGTTTCTGCCAATGTGGCTGGACCTCCACCTGTTTCTAATGCAGTTGCAGCGACCAAAAGAGTGGTCCAAAAACGGGGTCAGAAAAAAGGCACTGTGAAACCAAAACCTGAGAAAGCCATCGACAAGGAAGCTATCCCAGATAAGGAGATTCAGAAAGACAAGACAGGGGAAGGAGATGACAACTCTAAGAAGAATTCACACGCTTTTACTTCAGTGCTCACAGCTCGAAGCAAGGCAGCAAGCGGCATAACTGACAAACCGAAGGAGCACATTATTGACATTGATGCTGATGATGTTGACAATGAGCTTGCTGCTGTGGAGTATATTGATGACCTTTACAGGTTCTATAAGCTTGTTGAGAATGAGAACCGCCCTCATGACTACATAGAGTCACAACCTGAGATAAATGAGAGGTCGAGAGCTATACTAGTTAATTGGCTGATCGAAGTCAACACCAAATTTGGCCTTTCACTTGAGACCCTTTACTTGACAATCAATATCATTGATCGATTCCTATCAGTTAAGAGTATTCCAAGGAGTGAGGAACTGCAATTGGTTGGCATCAGTGCCATGCTGATGGCATCCAAGTATGAAGAAATCTGGGCCCCTGAGGTTGCAAGTCTTGTCTGCCTTACAACTTTCACTCCTGAACAGATACTGCTGATGGAGAAAACCATACTATATCAGCTGGAATGGACTTTGACTGTGCCAACACCTCTTGTTTTCCTGGTTCGTTTTATCAAGGCAACAGTCCCAGATCAGGAGATGGAAAACATGACTCATTTTCTGTCTGAGTTGGGATTGGTGAACTATGCCACCATAATGTATTGCCCATCAATGATTTCTGCCTCAGCAGTATTTGCAGCTAGATGCACTCTGAATAAGACTCCCCTTTGGAATGAGACACTTAAGTTGCACACTGGTTACTCACAAGAACAACTTATGGAATGTGCTAGATTATTGGTGAGCTTCCACTCCATGGTTGGGGATGAAGAAGAGCTGAAGGTAGTGCACAGAAAGTATTCTGATCCTCAGAAAGGAGCTGTCGCTATGCTCCCACCAGCTAAAAATCTTCTCCCTGAACCACACAGAGTTAACGAAACTGAAGAAGCAGGCAAAAAAACTCCCTTAGTTTTTTCATAA 1383 0.444 MASRTTVKQQGACEAVKGRKQQCAAKGRSRKVLGDIGNLANVEEVEVKPNRPITRSFGALLLAKAQAAAAAATDKNNKKRVSANVAGPPPVSNAVAATKRVVQKRGQKKGTVKPKPEKAIDKEAIPDKEIQKDKTGEGDDNSKKNSHAFTSVLTARSKAASGITDKPKEHIIDIDADDVDNELAAVEYIDDLYRFYKLVENENRPHDYIESQPEINERSRAILVNWLIEVNTKFGLSLETLYLTINIIDRFLSVKSIPRSEELQLVGISAMLMASKYEEIWAPEVASLVCLTTFTPEQILLMEKTILYQLEWTLTVPTPLVFLVRFIKATVPDQEMENMTHFLSELGLVNYATIMYCPSMISASAVFAARCTLNKTPLWNETLKLHTGYSQEQLMECARLLVSFHSMVGDEEELKVVHRKYSDPQKGAVAMLPPAKNLLPEPHRVNETEEAGKKTPLVFS 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01570 460 Pfam Cyclin, N-terminal domain 192 314 IPR006671 -
Viun1g01570 460 MobiDBLite consensus disorder prediction 110 144 - -
Viun1g01570 460 SUPERFAMILY Cyclin-like 316 436 IPR036915 -
Viun1g01570 460 Gene3D - 309 441 - -
Viun1g01570 460 SMART cyclin_7 321 403 IPR013763 -
Viun1g01570 460 SMART cyclin_7 225 308 IPR013763 -
Viun1g01570 460 CDD CYCLIN_AtCycB-like_rpt2 317 434 - -
Viun1g01570 460 ProSitePatterns Cyclins signature. 220 251 IPR006671 -
Viun1g01570 460 PANTHER CYCLINS 143 423 IPR039361 -
Viun1g01570 460 SMART Cyclin_C_2 317 435 IPR004367 -
Viun1g01570 460 PIRSF Cyclin_A_B_D_E 1 447 IPR046965 GO:0016538|GO:0044772
Viun1g01570 460 Pfam Cyclin, C-terminal domain 317 434 IPR004367 -
Viun1g01570 460 Gene3D - 205 308 - -
Viun1g01570 460 SUPERFAMILY Cyclin-like 180 314 IPR036915 -
Viun1g01570 460 FunFam G2/mitotic-specific cyclin-1 305 430 - -
Viun1g01570 460 MobiDBLite consensus disorder prediction 72 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01570 Viun-Chr1 27337111 27339790 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01570 1 439 Core Cell Cycle Gene Families AT4G37490 48.018 3.96e-124 366
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01570 K21777 - gmx:547919 603.594