Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Viun1g01568 | ATGCCTTCGAGCTCGAATTCGAAGCAGAAAAAGAAGCAATCGAAGGCGCAAAACTCACCATTGTCGTCGAATGCCACCACCACGCCTTCCAAAACGCCGCATCAACAAGGGCAAGAGCATGCCTCTTTATGCGAAGAAGCTTCTAGAAAGTTCCCTTCTCTCATCGCCAAATCCGCGTTTGTCGCCGAAATCATCCATGTCGACGACACTGTTCCCCTCTTCAAGGGTTTCAGAATTTGGCTCTCCGAACCTTCCATGCTCTCCTCCTCTCTCTCTCCGGGTTCTATTGTCTCGGTGTCTATTCCATCTTCAGACGAGAAAAGTTCACAATTGCATAGTTTTCCCCTCTTGTCATTAGCTAATGAGTGTGCCAAATGCCATGGACTGGAACTTGGGAAGGCAGTTGATGATGATGTTGCGGGGAACTACTTTGTGCTTGCAACGGTGTTTCCTGCTAGTAAGGTTTTGAAGAATGGAGTACGCCTGTCTTCAAACCTTTATTATACCATGGGATGTCCTCCTATGGGCACAAGTGTGTTTGTTTGTGCATTACAGAAACAACTCTTGCCTACTCCTGCCAGTGGGAGCAATCAACAGCATTATATGGAAAATAATTGTCTACCTATTAGTAATTGCAAGGAATTGTATCTTCAGTTGGTTCCTTCTAAAAGTGGACTTCCGAAGTTTAATAACTTTCCCTCATTGGACGTGTCTAAGGTGAAATCTCATGTCCAATTTGAGAATGACATTGTTGCTTCTCCTGCAACGCCTTCTTATGTATCAAAGTTTTCTAATGCTAGTGGTTTGTCTTCTCCACAATTTGACGATTCAGCATCTAGTGTGCCAAATCAGAAGAGTCAATCACTGATTTCATCTGATGTCATCTTAGCATTAAGTGATGAAAGTTCTAAACAGCCACTTGAGACATGGGCAACTTCATGGTTATACTCTCGATCTTTACTTCTGGGGAATCTTGTCAGATTTCCGATGTTTTCAGAGTGCTTTTTCCAGGTGATAGGAGCTAAGAAGCAGCGAGTTGCCAAATCTGGTCATTATCCATCAAATGGAAGCAGTGATTTCTACCCCGAGGATTCTGATGTAGCAGATAGTGTAAATCAGGCTTTCACTGTTAATTATGAAACAAAGGTATTTTTATCTCTGCCGTCAAATGCAGCATCTGAAGAGCCAATTCAAAAGGATATACCTTGTGTAAAACAAGAATACAAAGTTGCTAATGCTAGCTTACCAGATAAAATCTCTAAATTAGGTGGTCTATCCAAAGAGTATACACTTCTAAAGGACATAATTTCTTCGTCGGTGAATGATGCTTTATCAAGCTTTGGTCTAAGAACTACAAGAGGTGTCCTTCTTCATGGTCCAACCGGTACAGGAAAGACTTCCCTGGCTCAATTATGTACTCATGATGTTGGAGTCAAATTTTTCCCAATAAATGGACCTGAAATTGTTACCCAATATTATGGGGAAAGTGAGCAAGCTTTGCATAAAGTTTTTGATTCTGCCATTGAAGCTGCACCTGCTGTGGTATTCATTGATGAATTAGATGCAATTGCTCCTGCAAGGAAAGAAGGAGGTGAAGAGCTATCTCAAAGATTGGTTGCGACTTTATTGAATATGATGGATGGAATTAGTAGAACTGAAGGGTTACTTGTAATTGGTGCCACTAACCGCCCTGACCATATTGAGCCAGCTCTCAGACGACCTGGAAGATTTGACAAGGAAATTGAAATTAGTGTGCCATCCCCCAAACAACGTTCAGATATTTTGTTCACTCTTCTCAATGAAATGGATCATTGTCTCTCTGAGTTAAATATTGAACAGCTTGCTGCAGTCACTCATGGTTTTGTGGGTGCTGATCTAGCTGCACTTTGCAATGAAGCAGCCTTGATTTGTCTACGGCGTTATGCTTGCTTTAAGAAGACTAATGATTCTAGTTCTGATCATATAGCCGAGAAGTCTGTTCTGATGAATGGTGCAACAAACTCAATAGATCATTTGGATGAGGCAACTTCATCTACTTCAGATATGTGGGCCACCAGAAGGACTTACGAAACTATGGATTTAATTCATAGTGGCAAAGAAGATCAGATTTTGAAAGTAAGCTTTGAAGATTTTCAGGAGGCCAGGATGAAAATAAGACCTAGTGCCATGAGAGAGGTAATTCTTGAGGTTCCAAAGGTTAATTGGGAAGATGTTGGCGGTCAAAAGGAGGTCAAAGCTCAATTGATGGAAGCAGTTGAATGGCCACAGAAACATCATGATGCATTCGACCGTATCGGAACTCGCCCTCCTACTGGTGTATTGATGTTTGGACCTCCAGGTTGTAGTAAAACTCTCATGGCACGTGCAGTTGCTTCTGAAGCAGGGTTGAACTTTCTAGCCGTCAAGGGTCCTGAACTCTTTAGCAAATGGGTTGGTGAATCTGAGAAGGCCGTCAGAACATTATTTGCAAAAGCAAGGGCCAATGCCCCATCAATAGTATTTTTTGATGAAATAGACAGTCTTGCTGTAACTCGTGGGAAGGAAAGTGATGGAGTTTCAGTCTCAGATAGGGTCATGAGTCAACTTCTTGTTGAGTTAGATGGTCTACATCAAAGAGTTAATGTCACTGTCATAGCTGCTACAAATAGGCCAGACAAGATTGACCCTGCCCTTTTAAGGCCAGGACGCTTTGACCGTCTGCTATATGTTGGACCTCCAAATGAGGTGGATAGGGAAGAGATATTTCGCATTCATCTACGTAAAAGCCCATGCGGTTCTGATGTTAGCCTTAGAGAACTAGCTCTACTCACCGATGGTTGTACTGGGGCTGACATATCATTTATATGTCGGGAGGCAGCTGTTGCAGCAATTGAGGAGAGCGTTGATGGTTCAGTTATATCAATGGAGCATTTAAATATGGCAATCAAACAGATCCAGCCATCAGATGTTCACTCCTACCAAAAGCTGTCAACAAAATTTCAAAGGGCCGTCACTCCAGTGATATAA | 3006 | 0.4228 | MPSSSNSKQKKKQSKAQNSPLSSNATTTPSKTPHQQGQEHASLCEEASRKFPSLIAKSAFVAEIIHVDDTVPLFKGFRIWLSEPSMLSSSLSPGSIVSVSIPSSDEKSSQLHSFPLLSLANECAKCHGLELGKAVDDDVAGNYFVLATVFPASKVLKNGVRLSSNLYYTMGCPPMGTSVFVCALQKQLLPTPASGSNQQHYMENNCLPISNCKELYLQLVPSKSGLPKFNNFPSLDVSKVKSHVQFENDIVASPATPSYVSKFSNASGLSSPQFDDSASSVPNQKSQSLISSDVILALSDESSKQPLETWATSWLYSRSLLLGNLVRFPMFSECFFQVIGAKKQRVAKSGHYPSNGSSDFYPEDSDVADSVNQAFTVNYETKVFLSLPSNAASEEPIQKDIPCVKQEYKVANASLPDKISKLGGLSKEYTLLKDIISSSVNDALSSFGLRTTRGVLLHGPTGTGKTSLAQLCTHDVGVKFFPINGPEIVTQYYGESEQALHKVFDSAIEAAPAVVFIDELDAIAPARKEGGEELSQRLVATLLNMMDGISRTEGLLVIGATNRPDHIEPALRRPGRFDKEIEISVPSPKQRSDILFTLLNEMDHCLSELNIEQLAAVTHGFVGADLAALCNEAALICLRRYACFKKTNDSSSDHIAEKSVLMNGATNSIDHLDEATSSTSDMWATRRTYETMDLIHSGKEDQILKVSFEDFQEARMKIRPSAMREVILEVPKVNWEDVGGQKEVKAQLMEAVEWPQKHHDAFDRIGTRPPTGVLMFGPPGCSKTLMARAVASEAGLNFLAVKGPELFSKWVGESEKAVRTLFAKARANAPSIVFFDEIDSLAVTRGKESDGVSVSDRVMSQLLVELDGLHQRVNVTVIAATNRPDKIDPALLRPGRFDRLLYVGPPNEVDREEIFRIHLRKSPCGSDVSLRELALLTDGCTGADISFICREAAVAAIEESVDGSVISMEHLNMAIKQIQPSDVHSYQKLSTKFQRAVTPVI | 1001 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Viun1g01568 | 1001 | FunFam | Calmodulin-interacting protein 111 | 586 | 733 | - | - | |
Viun1g01568 | 1001 | MobiDBLite | consensus disorder prediction | 1 | 42 | - | - | |
Viun1g01568 | 1001 | FunFam | calmodulin-interacting protein 111 isoform X1 | 730 | 905 | - | - | |
Viun1g01568 | 1001 | Gene3D | - | 587 | 720 | - | - | |
Viun1g01568 | 1001 | Gene3D | - | 730 | 979 | IPR027417 | - | |
Viun1g01568 | 1001 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 731 | 984 | IPR027417 | - | |
Viun1g01568 | 1001 | ProSitePatterns | AAA-protein family signature. | 875 | 893 | IPR003960 | GO:0005524|GO:0016887 | |
Viun1g01568 | 1001 | PANTHER | AAA-FAMILY ATPASE | 71 | 994 | - | - | |
Viun1g01568 | 1001 | FunFam | Putative vesicular transport protein (CDC48) | 406 | 584 | - | - | |
Viun1g01568 | 1001 | Pfam | ATPase family associated with various cellular activities (AAA) | 455 | 584 | IPR003959 | GO:0005524|GO:0016887 | |
Viun1g01568 | 1001 | Pfam | ATPase family associated with various cellular activities (AAA) | 773 | 904 | IPR003959 | GO:0005524|GO:0016887 | |
Viun1g01568 | 1001 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 418 | 640 | IPR027417 | - | |
Viun1g01568 | 1001 | FunFam | spermatogenesis-associated protein 5-like protein 1 | 906 | 988 | - | - | |
Viun1g01568 | 1001 | SMART | AAA_5 | 769 | 907 | IPR003593 | GO:0016887 | |
Viun1g01568 | 1001 | SMART | AAA_5 | 451 | 587 | IPR003593 | GO:0016887 | |
Viun1g01568 | 1001 | CDD | RecA-like_CDC48_r2-like | 744 | 903 | - | - | |
Viun1g01568 | 1001 | Pfam | AAA+ lid domain | 609 | 640 | IPR041569 | - | |
Viun1g01568 | 1001 | Pfam | AAA+ lid domain | 927 | 972 | IPR041569 | - | |
Viun1g01568 | 1001 | MobiDBLite | consensus disorder prediction | 1 | 43 | - | - | |
Viun1g01568 | 1001 | Gene3D | - | 906 | 976 | - | - | |
Viun1g01568 | 1001 | Gene3D | - | 403 | 586 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Viun1g01568 | Viun-Chr1 | 27294289 | 27303942 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Viun1g01568 | 1 | 997 | Calmodulin-binding Proteins | AT3G56690 | 55.136 | 0.0 | 980 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Viun1g01568 | - | - | vum:124834498 | 1724.91 |