Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01548 ATGGGAAAGGGCGAAGAAGAACAGCAGCCTCTGCCTCCGTCCCAGGATCCGCCGAGGAATGCGGAGTGTCGGTGCCGCTGTTCTCGGATTCGGAAGTTTGTCGGCGCCAGATGCATCATCGTACTGCTCCTGTCGGTCGCGCTGTTCCTGTCTGCGGCGTTTTGGTTGCCCCCTTTTATGAGCCTCGCAGATCGGAGGAACCTTCATGGAGGTTCCAGATTCAAAGATCATGATATTGTTGCCAGCTTTATCGTCAATAAATCTGTGTCTTTGCTAGAAGATTACAAGTTTCAGCTTGCAGATGAAATTTTTGATGAGATTGATGCTCCCTCTAGCAAAGTAGCTGTCGTGTCTCTAGAATCCTTACCTGGGCCAAACAAGACAAGAGTGGTTTTTTCAGTTGATTCTGAAGATAAAGGCACAGAAATGTCCTATGCTGTCATCAGTTTGATAAGAGCTTCATTTACGTCCCTGGTTATACGCCAATCAATTCTGCAGCTTACTTCTTCATCCTTGTTTGGAGATCCCTACTCTTTTGAAGTGCTGAAATTGAAGGGAGGAATTACTATAATTCCACAACAGAATGCATTTCCTCTGCAGAAAGGGCAAGCAAAGTTTAGCTTTAAATTGAATTTCCCCATTTATCAAATACAATCCAATTTTAAGGAGCTCACTAGTCAGTTAAAGTCTGGATTACATCTGACATCCTTTGAGAACTTGTACATCAGCTTATCAAATTCTGATGGTTCAACAGTCGATGCTCCTACTCTTGTCCAGTCAACAGTTCTACTTGCAGTTGGGATTACTCCTTCAGAAGAGAGGCTAAAGCAACTGGCACAAACCATCATGGGACCACATAATCTGGGCTTGAATCACACTGAGTTTGGTAGGGTTAAGCAGGTCCAACTTTCATCCGTCTTGCAACACTCCCTTCATGGAAATGATGGTGGTGGCTCTGCATGGTCACCTTCTCCTGCTCCTCTGGCACATCCTCCACACCACCACCACCATCAACACCGGCATCATCACCATCATCACCATGATGCCCATCTTTCTCCTGAAATTTCTCCTTTACCCTCATCTACACACGTACCAGCACCACCGGCACCAGCACCAACACCTACGCCAACACCTACACATAGACATGCACATACTCATGCACATACTCATGCACATACACCTACACCTATGCCTTCATCTACACCCAGGAAGGGTGTGCCTCCACCAAGGGTTGGTTCTCCTACTGCAGCAAAAGTTGCACCTGCACCAAGGAAAAGTTCTCAATCTCAGCCTCCAAATTGTCGATTTGGTTTTAGAAAAAGGTCTACCCATAATTCTGGGAAGCACGCTCATCCTCCAACACCTGCAGTTGCCCCTATTATTAACACACATCATCCTGTTCCTGTTGCATCACCAAAATCGCATATTGACCCCCCTACACATGTCTCTCATTCAGAACCTGCCTTGAGTCCTTTACCGAATGTAGCTTTTGCTCATGCTGAGCCCCCTCCCAAGAGTGAACTTGCCCCAGAACATTATTACACGCATTTACCTGGGCTATCATCATCTTCTGCAGGTTGTCTTGGAACTGCTAAATGGTCATTTTTAATGCTTATAGTACTTGTGTTACGGGTATAA 1638 0.4585 MGKGEEEQQPLPPSQDPPRNAECRCRCSRIRKFVGARCIIVLLLSVALFLSAAFWLPPFMSLADRRNLHGGSRFKDHDIVASFIVNKSVSLLEDYKFQLADEIFDEIDAPSSKVAVVSLESLPGPNKTRVVFSVDSEDKGTEMSYAVISLIRASFTSLVIRQSILQLTSSSLFGDPYSFEVLKLKGGITIIPQQNAFPLQKGQAKFSFKLNFPIYQIQSNFKELTSQLKSGLHLTSFENLYISLSNSDGSTVDAPTLVQSTVLLAVGITPSEERLKQLAQTIMGPHNLGLNHTEFGRVKQVQLSSVLQHSLHGNDGGGSAWSPSPAPLAHPPHHHHHQHRHHHHHHHDAHLSPEISPLPSSTHVPAPPAPAPTPTPTPTHRHAHTHAHTHAHTPTPMPSSTPRKGVPPPRVGSPTAAKVAPAPRKSSQSQPPNCRFGFRKRSTHNSGKHAHPPTPAVAPIINTHHPVPVASPKSHIDPPTHVSHSEPALSPLPNVAFAHAEPPPKSELAPEHYYTHLPGLSSSSAGCLGTAKWSFLMLIVLVLRV 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01548 545 MobiDBLite consensus disorder prediction 422 440 - -
Viun1g01548 545 MobiDBLite consensus disorder prediction 1 21 - -
Viun1g01548 545 MobiDBLite consensus disorder prediction 360 377 - -
Viun1g01548 545 MobiDBLite consensus disorder prediction 309 457 - -
Viun1g01548 545 MobiDBLite consensus disorder prediction 330 348 - -
Viun1g01548 545 PANTHER F20B24.21 1 367 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01548 Viun-Chr1 27034635 27039603 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01548 19 307 C3H Transcription Factor Family AT3G10810 53.265 2.91e-80 258
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01548 - - vum:124835776 904.434