Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01496 ATGGGATCTCAAGGTGGGGCAATCCAGGAGCCAAAGAATGGGTCTTTGGCAAGGCAAGGGTCTTTGTATAATCTCACCCTTGATGAGGTGCACAACCAGCTTGGAAATTTGGGGAAACCCTTAGGAAGCATGAATCTTGATGAGCTGCTCAAGGGTGTGTGGACTGCAGAATCTGGAACTGATGCATACATGCAGCAAGGTCAGGTAGCTTCTGCTGGATCATCTTTGAATCCTCAAGGGAGTTTAACATTGTGTGGGGATCTTAGTAAGAAAACAATTGATGAGGTTTGGAGAGATATGCAACAGAAGAAGAGTGTTAGTCAGGAAAGAGAAAGACAACCTACACTGGGTGAGATGACCCTGGAGGATTTCTTGGTGAAGGCTGGTGTGACTACTGAGCTTTTCTCTAATGAGGATAGTGCCATGGCCATGCCAGGGGTTGATTCCCAACACAACACATCACAACATGCTCATTGGCTGCAATACCAGCTCACTTCAGTGCAGCAGCAGCAGCCACAACAACAACATCATCAACATCAAAATCACCAGAATAGTTTGATGCCGGGTTTTTCGGGTTTTATGGCTGTTCAACAGCCTATGCCTGTTGTGGTGAATCCGGTTCTGGATGCAGGATACCCTGAAGCAATGCCGTCTTCTTTGATGGGCGCCTTATCTGATTCACAATCTGCAGGTAGAAAAAGGGCTGCCTCAGGTAATGTGGTTGAGAAAACTGTGGAGAGGAGGCAGAAGAGGATGATTAAAAATAGGGAATCAGCAGCTCGGTCCCGGGCTAGAAAGCAGGCTTACACACAAGAGCTGGAGATTAAAGTTTCGCGTTTGGAAGAAGAGAATGAAAGGCTTAGAAGACAGAATGAGATAGAGAAGGTACTGCCAAGTGCACCGCCACCAGACCCTAAGCATCAGCTTCGCAGAACTAGTTCAGCTCCCCTTTGA 954 0.4717 MGSQGGAIQEPKNGSLARQGSLYNLTLDEVHNQLGNLGKPLGSMNLDELLKGVWTAESGTDAYMQQGQVASAGSSLNPQGSLTLCGDLSKKTIDEVWRDMQQKKSVSQERERQPTLGEMTLEDFLVKAGVTTELFSNEDSAMAMPGVDSQHNTSQHAHWLQYQLTSVQQQQPQQQHHQHQNHQNSLMPGFSGFMAVQQPMPVVVNPVLDAGYPEAMPSSLMGALSDSQSAGRKRAASGNVVEKTVERRQKRMIKNRESAARSRARKQAYTQELEIKVSRLEEENERLRRQNEIEKVLPSAPPPDPKHQLRRTSSAPL 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01496 317 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 245 297 - -
Viun1g01496 317 Gene3D - 245 297 - -
Viun1g01496 317 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 250 265 IPR004827 GO:0003700|GO:0006355
Viun1g01496 317 Pfam bZIP transcription factor 247 292 IPR004827 GO:0003700|GO:0006355
Viun1g01496 317 SMART brlzneu 243 315 IPR004827 GO:0003700|GO:0006355
Viun1g01496 317 PRINTS cAMP response element binding (CREB) protein signature 242 258 - -
Viun1g01496 317 PRINTS cAMP response element binding (CREB) protein signature 280 297 - -
Viun1g01496 317 PRINTS cAMP response element binding (CREB) protein signature 141 156 - -
Viun1g01496 317 PRINTS cAMP response element binding (CREB) protein signature 260 280 - -
Viun1g01496 317 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 16 316 IPR043452 GO:0003700|GO:0045893
Viun1g01496 317 Coils Coil 263 297 - -
Viun1g01496 317 MobiDBLite consensus disorder prediction 165 187 - -
Viun1g01496 317 SUPERFAMILY Leucine zipper domain 247 293 IPR046347 GO:0003700|GO:0006355
Viun1g01496 317 CDD bZIP_plant_BZIP46 247 292 - -
Viun1g01496 317 MobiDBLite consensus disorder prediction 291 317 - -
Viun1g01496 317 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 245 290 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01496 Viun-Chr1 26552370 26556802 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01496 1 317 bZIP Transcription Factor Family AT3G56850 56.707 2.62e-107 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Viun1g01496 bZIP_1 8.5e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01496 K14432 - gmx:100783666 483.026