Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01494 ATGTACCACGCAAAGAAGTTTTCATCGCCTGGCATGGTGCCCTATAAATCTCAAGGTGGTGCTGAACAACTTGCAAATGTTGAGGTTTTGGGTGGATCTGCTGCAAAAAATGCCACACCTGCTGGAGGAAGTGGGAAGCAGCGTTTAAGGTGGACATCCGATCTTCATGACCGTTTTGTGGATGCCATTACACAACTTGGTGGACCAGATAGAGCAACCCCAAAAGGTGTCCTTAGAGTGATGGGTGTTCCTGGACTGACCATTTATCATGTTAAAAGCCATTTACAGAAATATCGTCTTGCAAAGTATTTACCTGAATCACCAGCTGATGGTAAAGACTCTAAAGATGAGAAGAGGAATTCTGGAGACAGCTTTTCTGGCGCAGATTCTTCCCCGGGAATGCCAATCAATGATGCCTTAAGAATGCAGATGGAGGTTCAGAAACGTCTGCATGAGCAGCTTGAGGTTCAAAAGCAATTACAAATGAGAATTGAAGCACAGGGTAAATACTTACAAAAGATCATAGAGGAACAGCAGAAATTAGGTAATACTTTAACAACCTCCGAAACACTTCCTTCATCGCATGATAAGCAAACTCATCCACACTCGGAGGCTTCTGGATCTAGTGATGCCCTTGCAAGCACTTTGTCTCCTCGTAAAAAACAGAGAATCGATGATGGTTCCAAGGATGGCTTCACTGCTTCCCATGTAAGAAAGACTGAACAAAAGAATGAGTGCAATGTTGGTCAGTTGGATCCAAATTTGTATGATGATGCTGGGTTTGGATTTGATTTGGAGACAAACAAACATAAGGAGAGTGGACAGTAA 828 0.4312 MYHAKKFSSPGMVPYKSQGGAEQLANVEVLGGSAAKNATPAGGSGKQRLRWTSDLHDRFVDAITQLGGPDRATPKGVLRVMGVPGLTIYHVKSHLQKYRLAKYLPESPADGKDSKDEKRNSGDSFSGADSSPGMPINDALRMQMEVQKRLHEQLEVQKQLQMRIEAQGKYLQKIIEEQQKLGNTLTTSETLPSSHDKQTHPHSEASGSSDALASTLSPRKKQRIDDGSKDGFTASHVRKTEQKNECNVGQLDPNLYDDAGFGFDLETNKHKESGQ 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01494 275 Coils Coil 137 157 - -
Viun1g01494 275 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 45 230 IPR044848 GO:0003700
Viun1g01494 275 MobiDBLite consensus disorder prediction 106 123 - -
Viun1g01494 275 Pfam Myb-like DNA-binding domain 49 99 IPR001005 -
Viun1g01494 275 Pfam MYB-CC type transfactor, LHEQLE motif 134 180 IPR025756 -
Viun1g01494 275 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Viun1g01494 275 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
Viun1g01494 275 MobiDBLite consensus disorder prediction 186 275 - -
Viun1g01494 275 SUPERFAMILY Homeodomain-like 45 100 IPR009057 -
Viun1g01494 275 MobiDBLite consensus disorder prediction 219 245 - -
Viun1g01494 275 Gene3D - 45 104 - -
Viun1g01494 275 FunFam Myb family transcription factor 45 103 - -
Viun1g01494 275 MobiDBLite consensus disorder prediction 106 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01494 Viun-Chr1 26546335 26550272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01494 42 178 G2-like Transcription Factor Family AT4G28610 57.664 1.87e-49 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Viun1g01494 Myb_DNA-binding 2.6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01494 - - gmx:100783132 472.241