Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01417 ATGTTCTCCACCGCCACAGTTTCTGTCCCCAAACGCATGGGGTTCAGAGTCGGTGTCACTTTGTTCCTGAATATCTCCTTCCTCATGATCGTGTTTTGTGTTTCTCTTATTGCCCACTTCCATTCTTCGGATCATGTTGTTCTGAGGAGAAACCTGTTAGGCTTGAGGGGGGTTGAAAAAGATTGCAAAAGTTTCCACAAATTGAAAGACTCAAAAGCCAAGTGTTTTTACTTGAAATCCAATGATCCGTGTGTTTCTCAGGGTTATGTCGACTACCTTTACATTTTCTATTGCAAAGTGGGGGATTTCCCTCTTTTGGGTCATAGTCTTTTGTTTCTTTGGCTTTTGGTTCTGTTCTACCTGTTGGCCAACACAGCCTCCGAATACTTTTGTCCTTCTCTTGAGAATTTGTCCAAATTGCTGAGGCTCTCTCCCACAATTGCTGGGGTGACTCTTCTCTCTCTTGGAAATGGTGCTAATGATGTTTTTGCCACCCTTGTCTCTTTTAAGGGTAGTGGGACCCAGGACATTGGTTTCAACACTGTGCTTGGAGGTGCATCCTTTGTTTCTTGTGTTGTGGTTGGAATAGTAAGCATTTCAATTAGGCAAAGGGGGATTCGGGTCAAGAAGTGGGCCTTGGTGAGAGATGTCTGTTTCCTTCTCCTGGTTCTTTTCTGTTTGTTGATCATTTTGATCACAGGTGAAATCAGTGTTCCTGGGGCAATTGGTTTTTGCTTGATGTATGTGGTGTATGTGGTGGTTGTTTATGTCTCATCTAAACGAGGGAACAAAGGTGTATGTGACGATGCTGATACTGAAAGTGATGGTGATTTGAGTCATGGTGGTGGCAATGATTTAGGTGTGCCTTTGCTTATTGGGATGGAGAAAGGACTTGCAGATACAACTCTGGAATTTGAAGTGAAAACAGGGAGGAAATGTTGCTGTTTAAAATCTTCAATTTGTAGAATGTTACTTTGTGTCATGGAGATGCCACTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTTTGTGAAGAAAGATGGTCCAAAGGGTATGCAGTTTGTTCAGCTATGCTAGCACCACTTCTACTGTCTTTCTTGTGGGTACCAAACAAGGAAAACAACTTCAACCCAAACCTTATTGTTTGTGGAATTGCATTGTTGGTTGGGATTACACTAGGGGTAACAGCATTTTTCACAACCAATGTGTCAAGCCCTCCAAGGAAGTACTTGTTTCCTTGGCTTGCAGGAGGGTTTGTGATGAGTGTGACTTGGAGCTACATTTCAGCTCAAGAATTGGTGGGGTTGCTGGTTTCACTTGGTTACATATGTGGGGTCAGTCCTTCAATTCTGGGGCTAACAGTTCTTGCATGGGGGAATTCACTTGGGGATTTGGTGACAAATTTGACAATGGCTTTGTATGGTGGATCAGAAGGTGCTCAGATTGCAATATCAGGGTGTTATGCTGGTCCTATCTTCAATATAGTGGTTGGATTAGGCTTATCTCTTGTGAGCACTACTTGGTCAGAGTACCCATTTTCTGTTGTGATTCCTAAAGATCCATATCTTTGGGAGACATTAGCACTTTTGGCAGTTGGATTGGTTTGGGCTCTTGTTGTGTTGATTAGAAGAGATATGAAACTTGATGCAGTATTGGGAGTAGGACTCTTGGTTATTTACTTCATTTCTCTGTTTCTGAGGCTGATTCAGACACTTGGGTCACTCCAATTTCAGAATATGATAAACTCACTCTTCATAACATCATAA 1767 0.4233 MFSTATVSVPKRMGFRVGVTLFLNISFLMIVFCVSLIAHFHSSDHVVLRRNLLGLRGVEKDCKSFHKLKDSKAKCFYLKSNDPCVSQGYVDYLYIFYCKVGDFPLLGHSLLFLWLLVLFYLLANTASEYFCPSLENLSKLLRLSPTIAGVTLLSLGNGANDVFATLVSFKGSGTQDIGFNTVLGGASFVSCVVVGIVSISIRQRGIRVKKWALVRDVCFLLLVLFCLLIILITGEISVPGAIGFCLMYVVYVVVVYVSSKRGNKGVCDDADTESDGDLSHGGGNDLGVPLLIGMEKGLADTTLEFEVKTGRKCCCLKSSICRMLLCVMEMPLYLPRRLTIPVVCEERWSKGYAVCSAMLAPLLLSFLWVPNKENNFNPNLIVCGIALLVGITLGVTAFFTTNVSSPPRKYLFPWLAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNLTMALYGGSEGAQIAISGCYAGPIFNIVVGLGLSLVSTTWSEYPFSVVIPKDPYLWETLALLAVGLVWALVVLIRRDMKLDAVLGVGLLVIYFISLFLRLIQTLGSLQFQNMINSLFITS 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01417 588 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 302 576 - -
Viun1g01417 588 Gene3D - 143 268 IPR044880 -
Viun1g01417 588 Gene3D - 353 568 IPR044880 -
Viun1g01417 588 Pfam Sodium/calcium exchanger protein 415 567 IPR004837 GO:0016020|GO:0055085
Viun1g01417 588 Pfam Sodium/calcium exchanger protein 112 256 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01417 Viun-Chr1 25563878 25566198 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01417 13 576 Antiporters AT5G17850 52.098 1.90e-168 489
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01417 K13754 - gmx:100787016 890.952